Effector profile
PlantPEAD ID: PlantPEAD16257 | Uniprot ID: A0A3M5FNK4 | Source: Orthologous |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 29438 | Pathogen type: Bacteria |
Species: Pseudomonas savastanoi | Strain: pv. savastanoi | Other name: |
Gene name: | NCBI Gene ID: RBSW01000309 | |
Entry name: A0A3M5FNK4_PSESS | Protein name: Avirulence protein AvrRps4-like C-terminal domain-containing protein | |
DOI: |
Gene/Protein information
Gene sequence:
ATGAATCGAATTTCAACCAGTTCAGTAAATTCCAGCTTCAGTTACTCGGCCCCTGTAGAGGAAGCGCAAAACCGCGTTTCCTCAGCCCCCACCAACTCCTCTCCACCTGGCACCACAACCGCTGTCGCCCAGGCGTCAGAGGGGCAAAAAAAGCCGGGGGCGGTATTAAGCATGCAGGCACAGCGACTGCGCCAATTGTGTGAGAGTTCATCTTACCAGTACCGGCAGAACGCGCTATTAGCTAAATCTTTTGATGCTCAACGCCTAGACATTAACACTCAAGCGGGCCCTTCCAATAGCCCTCACCTGAACGCTCTCAACAAGCTCCAACAACGAGACTTCAAACCTGCGGCTGGCGGGCTAGAAATCCCATTTACACCCAAATCCCTATTGGGCGGAGGTAAACGAGTCTATCAAATTGGCTCATCGTCACGCGACGTACAAGTCTGCCCACGTGGAGCTGGTGCTGCATTGAGGCAAGAAATCGAAGATAAGCAACTCATGGTTAACAATCTCACGGACGAGCTTCAAGACGCTATAGATGAGGCCAACCCAGCCGAAATAGCCAGTACTTCACAACAGCTGCGCCAAGCACGGTCTGACCTTGCTGAGCTACAGAGACGCTTTGCGGTACTCGGAAACGAAGACCGCAGAATCAACTAA
Protein sequence:
MNRISTSSVNSSFSYSAPVEEAQNRVSSAPTNSSPPGTTTAVAQASEGQKKPGAVLSMQAQRLRQLCESSSYQYRQNALLAKSFDAQRLDINTQAGPSNSPHLNALNKLQQRDFKPAAGGLEIPFTPKSLLGGGKRVYQIGSSSRDVQVCPRGAGAALRQEIEDKQLMVNNLTDELQDAIDEANPAEIASTSQQLRQARSDLAELQRRFAVLGNEDRRIN
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
23830.5 | 220 | 8.97 | -0.652 | 57.66 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR048928,IPR048927
Pfam: PF21611
SMART:
KEGG:
PRINTS: