Effector profile
| PlantPEAD ID: PlantPEAD16276 | Uniprot ID: A0A2K4TA13 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. persicae strain ICMP 5786 | Other name: |
| Gene name: | NCBI Gene ID: RBRT01000265 | |
| Entry name: A0A2K4TA13_9PSED | Protein name: Type III effector HopA1 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAACCCCATTCAGTCACGCTTCTCCAGTGTGCAAGAGCTCAGACGATCCAACGTTGATATTCCGGCGCTCAAAGCCAATGGCCAACTGGAGGTCGACGGCAAGAGGTACGAGATTCGTGCTGCCGATGACGGAACAATTTCGGTCCTTCGACCGGAGCAACAGTCCAAAGCGAAAAGTTTTTTCAAGGGCGCTTCTCAGTTGATAGGTGGCAGCAGCCAGCGCGCGCAGATTGCCCAGGCGCTCAACGAGAAAGTCGTATCGGCACGCACTGTATTGCACCAGGGCGCTGTGACGGGCGGACGCTTGGACACCCTTGAGCGGGGCGAAAGCAGCTCAGCCACAACAGCCATCAAACCCACTGCCAAACAGGCTGCGCAAAGTACTTTTAACAGCTTTCATGAGTGGGCAAAAGAGGCAGAGGCGATGCAAAACCCGTCTCGGATGGATATCTACAAGATCTATAAACAAGATGCACCTCACTCACACCCCATGAGCGACGAGCAGCAAGAAGAGTTCCTGCACACGCTAAAGGAGTTGAATGGCAAAAAGGGTATTGAGGTGCGCACCCAGGACCACGACAACGTCAGAAATAAAAAAGACCGCAACCTGGACAAGTACATTGCAGAGAGCCCGAACGCAAAGAAGTTCTTCTACCGAATTACCCCCAAACATGAGCGCCGAGAAGATAAGCATCAAGGGCGATTGACCATTGGCGTGCAACCCGAATATGCAGCACAGCTGACCCGCGCCATGGCAACCCTGATAGAGAAAGAAAGCGCAATCACGCAAGCCAAAGTAATAGGCCCCGCCTACCACGGCCAAATGACCGATTCGGCAGTTTTGTATATCAACGGTGATGTTGCAAAGGCAGAAAAGCTGGGCGAGAAACTGAAACAGATGAGCGGCATTCCTCTGGATGCGTTCGTTGAGCACACCCCTTTGAGCATGCAATCCCTGAGTAAAGGTCTGTCCTATGCAGAAAGCATCCTGGGCGACACCAGAGGCCATGGGATGTCGCGAGCGGAAGTGATCAGCGATGCCTTGAGGATGGACGGGATGCCATTTCTGGCCAGATTGAAGCTATCACTGTCTGCCAATGGCTATGACCCGGACAACCCGGCCCTTCGAAACACGAAATGA
Protein sequence:
MNPIQSRFSSVQELRRSNVDIPALKANGQLEVDGKRYEIRAADDGTISVLRPEQQSKAKSFFKGASQLIGGSSQRAQIAQALNEKVVSARTVLHQGAVTGGRLDTLERGESSSATTAIKPTAKQAAQSTFNSFHEWAKEAEAMQNPSRMDIYKIYKQDAPHSHPMSDEQQEEFLHTLKELNGKKGIEVRTQDHDNVRNKKDRNLDKYIAESPNAKKFFYRITPKHERREDKHQGRLTIGVQPEYAAQLTRAMATLIEKESAITQAKVIGPAYHGQMTDSAVLYINGDVAKAEKLGEKLKQMSGIPLDAFVEHTPLSMQSLSKGLSYAESILGDTRGHGMSRAEVISDALRMDGMPFLARLKLSLSANGYDPDNPALRNTK
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 42117.5 | 380 | 9.24 | -0.682 | 40.51 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR040871
Pfam: PF17914
SMART:
KEGG:
PRINTS: