Effector profile
| PlantPEAD ID: PlantPEAD16278 | Uniprot ID: A0A2K4X3I6 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: CFBP3840 | Other name: |
| Gene name: HrmA | NCBI Gene ID: LT963411 | |
| Entry name: A0A2K4X3I6_PSESX | Protein name: Protein HrmA | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTAGTTTTTTCTTAGCGCCGGATTTTCCGGATCATAGCCTCTTGCTTCCAGCGCCCTCTTGAGCCTGACTTCCATCGGGCCCTGGTCGTTCAAAGCGTCCAAGATGACGTGTGACCTAGCCTCTCCATGACTAACCGATTGCCCTGGAACTTTTTCAGCATAGGAAAGACCACGACCTGTCGAATGCATACACAGCGGTGTGTGTTCGACGAATCCCTCCGAGGGGATTCCGCTCATTTTTTTCAGCTTTTCGCCCAGTTTTGCTGATTTTGCAAGATCGCCATTTATGTAAAGAATGGCAGAATCAGTTTGCTTACCGTACTTCGCCGGGCCTACGACTTTACCTTGCGCTATCGCTTTTTCCTTGTCCATCAGACTGGCCATTGCGCGTGTCAACTGTGCTGCATATCTAGGTTCAACACTGATAGTAAGCCGTCCCCAGTTTGGTTCAATTGCGCGCTGTTCCTTAGGAGTAATTCTGAAAAAATCGGTTCTGGCATTGTTTTCGTTTGCGATATATCTACCAAGATCAAGCTGGTCTTCATTAAGTTCATCTTGAGCCTGCGGGCGTACGATAATATTTTTTTTGTGGTCGAGCTCAATGAGCGTCTGAAAATAATTTCTTTGCGCTGCGTCATTCATGAGTGTTGTTTTGGGCGTGTCATTCTTGTAGATCATGTAAACAACCTTTACGCTTTTGTGCGGAAGAGCTTCAGCTTCTGCAGCCCACTTTTGAAGACTGGCAAATGCCTGCTTTGATGACTGCAAGTGTGCATCATCAGCCTTGACAGCGCTGGAGACAGAGCTACTCCCACCTTTCTCCAAATCAAAATCAAAGCGCCTACCCAACATCCTCTCCAGACGGGGAGCAGATGCTGCTTTCTCATTGAGCACTTGGGCTATCTGTGCACGCTCGCTTTTTCCACCAATACGGTGCGTTACGCCTTTGAAGAATTTTACGGCTTTAGGCTGTTGATCAGGTTTGAGCACCGCAATTGAGCCATCATCGGCTGCGCGTATCTCGTAACGTTTGCCGTTGACCTCCAACTGACCCTCGGATTTAAGCGACTGAATATCAACGTTAGAGTGTCTGAGCGTTTCTACGCTCGAGAAACGGGCGTGGATAGGATTCAT
Protein sequence:
MNPIHARFSSVETLRHSNVDIQSLKSEGQLEVNGKRYEIRAADDGSIAVLKPDQQPKAVKFFKGVTHRIGGKSERAQIAQVLNEKAASAPRLERMLGRRFDFDLEKGGSSSVSSAVKADDAHLQSSKQAFASLQKWAAEAEALPHKSVKVVYMIYKNDTPKTTLMNDAAQRNYFQTLIELDHKKNIIVRPQAQDELNEDQLDLGRYIANENNARTDFFRITPKEQRAIEPNWGRLTISVEPRYAAQLTRAMASLMDKEKAIAQGKVVGPAKYGKQTDSAILYINGDLAKSAKLGEKLKKMSGIPSEGFVEHTPLCMHSTGRGLSYAEKVPGQSVSHGEARSHVILDALNDQGPMEVRLKRALEARGYDPENPALRKN
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 41858.5 | 377 | 9.39 | -0.619 | 37.78 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR040871
Pfam: PF17914
SMART:
KEGG:
PRINTS: