Effector profile
| PlantPEAD ID: PlantPEAD16378 | Uniprot ID: A0A3M2ZXB9 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. glycinea | Other name: Pseudomonas savastanoi pv. glycinea |
| Gene name: | NCBI Gene ID: RBNZ01000099 | |
| Entry name: A0A3M2ZXB9_PSESG | Protein name: Type III effector HopI1 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGATCAACCTCACCAGCATTGCATCCTCGTTGGCGCGTGTGGCGCTCAGCGATTCGACAAAGCCAACGATAGACCGCGCGCTGAACGTCGTTAGCCATATCGCTGGCAAAGTGGCGTTGCAGGTCAACAGCTCATTGCTGGAGCAGAAAGGCCGGCTCAACGAGCGCCAGCAGAAAGGCCTCGCGGTAATCCTGGACGCGTTGCGCGGCAAGGAGCCGGTGACCAATGTCGAGACCCATGAAGGCGGAGGCCGATTCAACCTGGCACGAGCTGCCTTCGACGTAGCCAGCGTTGTCTGGGAGCGCGACAAGTCGATGCATAACGTGATGAGCTTTTTGGGCGTCAGCGACAGCCAGGGCAAGATGTTGTTCTCTCTGGGCAAGAAGCTGGCCGACGCGATGGCCAAGCCCGAACTTGGGTATGGCAAGCACAACAGTGAGGCGAACTATGCGTTCTTCTCCAGCAACCTGAAGCTGAACAAACTGATGAACGACATCGCTGATCAACTGATCAACGAGATTCGTCAGTCGAACACCGATCGCGTACGACGACCCACACCGGGCCCATCCTGGAGACCTGAAAGCGCCCAACAACAAGCACGTCCGCAAACGCCTCCACGCACTCGCCCGCAGGCCAACAGCACACCGCCGCCACCGAAAGCAAAGCCCAATGCAGGCGCTAAGCGGCCGTCAACGCAACGGCCCCACAACACACCAGCCGCTGACGCTTCCTCGAAGGTGGGCGATTCCGGCCCCGCCAAGCCACCCGTCAAGCCGTTGTACGAGCACCTGGGACTCTCGGACATGACGGCAGACCTCTCCGCAGTCAAAACGGCCTACAAGAAAGCCGCGTTGAAGAACCATCCTGATAAAAACGCGGGCAACGTGGCGGAGGCGACTGAGCGTTTCAAAGTGATTTCAAATGCGTTCAAGATTTTGTCCGACCCAGAATTGCGCAAGAAATACGACAATGGCCTTATTAATGAGAAGGGCGACGAGGTCCAGGTCTGA
Protein sequence:
MINLTSIASSLARVALSDSTKPTIDRALNVVSHIAGKVALQVNSSLLEQKGRLNERQQKGLAVILDALRGKEPVTNVETHEGGGRFNLARAAFDVASVVWERDKSMHNVMSFLGVSDSQGKMLFSLGKKLADAMAKPELGYGKHNSEANYAFFSSNLKLNKLMNDIADQLINEIRQSNTDRVRRPTPGPSWRPESAQQQARPQTPPRTRPQANSTPPPPKAKPNAGAKRPSTQRPHNTPAADASSKVGDSGPAKPPVKPLYEHLGLSDMTADLSAVKTAYKKAALKNHPDKNAGNVAEATERFKVISNAFKILSDPELRKKYDNGLINEKGDEVQV
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 36507.4 | 336 | 9.84 | -0.636 | 38.18 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR001623,IPR036869
Pfam: PF00226
SMART: SM00271
KEGG:
PRINTS: PR00625