Effector profile
PlantPEAD ID: PlantPEAD16514 Uniprot ID: A0A0Q0I102 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. theae strain ICMP 3934 Other name:
Gene name: NCBI Gene ID: RBTL01000153
Entry name: A0A0Q0I102_PSESX Protein name: Type III effector HopM1
DOI:
Gene/Protein information
Gene sequence:
ATGACCGACATGAGAATCACTGCTTCACGCAGCGCCGAGATCCAGAGTGCCAGTCAGCAGAGTGAAATAGTCCCGGTCGCCGCCCATCCAAATGCGGTCACTCCCAGCAGCAATCCGCCACTGATGCCCAACCAGGCACGTCATCACGCGGCAGAAAGCTCTGCTGCCGGCGCAGCGCGGCTGAAGGTCGCGGTGCAGCACGAAAAACTCTTGAAGGAATTCCAGGCCGAGCAGGCGACGGCACCCGGCAGCGGTGCGCCCATGATCAGCGCGCGTGCCGCTTTTTTGATCGGTAGCTCGCTGCAATCCCTGCCGAAGTCCGAAAAAGTGCCCTTTGAGGTCATGGCTGAACGGCTGTCTCCTGAGCGCTATCAACTGAAACAGTTTCACGGCTCTGAGCTGCAGCAACTGTTGGGCAAATTTGCCCAGCCGAGGCAGGCGCCTGACAAGGCCGAAGTCGGGCAATTTATCAAGGGTTTTGCACGTTCAGTTGCAGATCAGGTAGAGCATTTCCAGCTTATGCACGATGCAACGGCCCATTCATTTGGCTCTGGTGGACTGCATGACCGAACGACTCTGGCTGTCAGTCAGAAAGCGCTTGGTGAGTATGCGGACCGCGCCAGCAAAGCGATTGAGGACGGGCTGAATGAAAGTATTACGTCACTGGACGGGCACATAGCAGATCTGGACGCTGCGCTGGGAAACGTCGAGGAGGGCGATAACCTCGTTCTTGAGATGGATAAACAAGCGCTGGTCAACGCCAAGGCGACTCTGGTCGATCTGCACGCAGAGTTCCCCAAGTCACCGGAAGCCAAGCGCCTGAATTCGGTGGCTGCTCATGCGCAGATGGATACTCTGGTCGACAAACTGAACGTGGATCGCAATTCTGTGGGCGGCTGGAAGGGTGTCGGGCCGATTGTGGCGGCGGCTGTTCCGCAATTCATTTCGTCCATGACCCACCTGGGCTTCGTCCGTACGGCCACCAGTGATGAGATGAAAAGCGCGGTACCCGGAAAAAGTAGCGACGCGAGCATGTTGAAGGCCGCAGTCGTGGGACTGGTTGCGGGGGTTGCCCACGAAGGGGTCACCAATCTGGTTAAGCCGTTGATTCAGGCCGGGTTGCAGAAGACCGGCCTCAATGAGCGCATGAACATGGTTCCGCTCAAGGGGATTGACACTAATTCTGTGATTCCGGATCCCTTTGAATTCAAGAATGAGGACGGTGCGCTCGTCAAGAAAACCGCTCAGGAAATGACCGAAGACAAAGCCTTCGTGGCGGGCGAACGAGCCGTTCTGAACCAGAAAAAAGTTCAGGTCTCGTCCACCCATCCACTGGGTGAAATGATCCCTTACGGCGCCTTTGGCGGTGGGCAGGCTGTTCGCCAGATGCTTCATGATTTCAATCAGATCAGCGGCCAGACGGTGACTGCAAAGGCGCTGACATCCGGGATGGCGGGTGCTATTTCGGCTACCACACAGACCATCGCACAGTTGAAGTCCAACTACGTGGATCCACAGGGGCGCAAGATCCCAGTCTTCACGCCTGACAGGAAAAATGCAGACCTGGGCAAGGATCTGGCCAAAGGGCTTGACCTGCGCGAGGCGACGGTGCGCACCGCGTTTTACAGCAAAGCCATATCGGGCATTCAAAGCTCTGCCGTGAACGCCCTGGTGCCACCGTTGGCAACCATGCCAAAAGGTGAGCCCGGCAGGCTCAGTGCGGGGAACATCCTGCGCAACATGGCGCTGGCTGCGACGGGCTCGGTGTCTTATCTGTCCACCCTTTACGCCAACCAGTCGATAACGGCTGAAGCCAAAGCGTTGAAGGACGCTGGCATGGGAGGCACGACACCGATGCTGGCCCGTACTGAGACCGCGTTGAACAATATCCGCCATCCGGATAGGGCATCTCTGCCACATACGTTCCAACCGGGTACGTTGGGTGGCGTGCCAAGAGCAGTGGAAAGCGCTTATCACGTGGGCAGGGGGGCTTTGCAATTACCGACCCAAATGGCCGTGGATACCGTAAGAGTCGTGGAGGAGGGGGTGTTGAACGCTCCATCTGCCGTGCGTAACGCGTTTAAATCAGAGAAACCTGCCGTCGAGGGTGACGAACTGGTTGCCATGGAGGAGGGCCGCAGACGCTAA
Protein sequence:
MTDMRITASRSAEIQSASQQSEIVPVAAHPNAVTPSSNPPLMPNQARHHAAESSAAGAARLKVAVQHEKLLKEFQAEQATAPGSGAPMISARAAFLIGSSLQSLPKSEKVPFEVMAERLSPERYQLKQFHGSELQQLLGKFAQPRQAPDKAEVGQFIKGFARSVADQVEHFQLMHDATAHSFGSGGLHDRTTLAVSQKALGEYADRASKAIEDGLNESITSLDGHIADLDAALGNVEEGDNLVLEMDKQALVNAKATLVDLHAEFPKSPEAKRLNSVAAHAQMDTLVDKLNVDRNSVGGWKGVGPIVAAAVPQFISSMTHLGFVRTATSDEMKSAVPGKSSDASMLKAAVVGLVAGVAHEGVTNLVKPLIQAGLQKTGLNERMNMVPLKGIDTNSVIPDPFEFKNEDGALVKKTAQEMTEDKAFVAGERAVLNQKKVQVSSTHPLGEMIPYGAFGGGQAVRQMLHDFNQISGQTVTAKALTSGMAGAISATTQTIAQLKSNYVDPQGRKIPVFTPDRKNADLGKDLAKGLDLREATVRTAFYSKAISGIQSSAVNALVPPLATMPKGEPGRLSAGNILRNMALAATGSVSYLSTLYANQSITAEAKALKDAGMGGTTPMLARTETALNNIRHPDRASLPHTFQPGTLGGVPRAVESAYHVGRGALQLPTQMAVDTVRVVEEGVLNAPSAVRNAFKSEKPAVEGDELVAMEEGRRR
Protein structure:
AlphaFold
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
75723 715 7.37 -0.232 33.41
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.