Effector profile
PlantPEAD ID: PlantPEAD16527 Uniprot ID: A0A0N8RGN8 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 47877 Pathogen type: Bacteria
Species: Pseudomonas amygdali Strain: pv. eriobotryae strain ICMP4455 Other name:
Gene name: HopQ1-1 NCBI Gene ID: BMZW01000080
Entry name: A0A0N8RGN8_PSEA0 Protein name: Type III effector
DOI:
Gene/Protein information
Gene sequence:
ATGCATCGTCCTATCACCGCAGGCCATACCACCTCACGTCTCATCCTAGATCAGTTAAAACAAATATCACGTACCCCATCGGAAAGTAGCGTGCAATCAGCACTTTCTCAGCAAGCAAGCATGAGCAGCCCAGTTTTGGAGCGGTCGAAAAGTGCGCCAGCTTTATTGACTGCGGCACAGCGCACGATGCTTGCACAAGTGGGAGCCTGTAACTCTCATCTGACCTCAGACGAAAACATGGCCATCAATGAACTGAGATTACACAAGCCCCGGTTACCTAAGGATACGTGGTTTTTCACTGATCCTAACAAGGACCCGGATGATGTCGTGACCTACACCTTGGGCAAGCAATTGCAGGCTGAGGGCTTTGTGCACATCACGGACGTAGTGGCAACACTGGGTGATGCTGAAGTTCGCTCTCAACGTGCCGAGATGGCCAAAGGCGTGTTCAACAAGCTTGGGTTGCATGACGTGCATGTGTCGCGTGGTCGGGATTACGCGATGAATTCGCTTCAGTCGAAGGAACATGCCAAATTTTTACTGGAAGGTCATGCTTTAAGGGCTGGACCTGGTGAAATACACCGCGACAGCTTGCAGGACATGAGCAGGCGCTTGGCCCGTGCGCCACATGGAGTCAGTATTGTCGTAATTGCAGGCATGAGTGATATCAATGCTCTCATCACTACCTGCCCGGATATGGTGCGCGAACGGGTTGATGACATCACCATCATGGGCGGCGTCGAGCCTTTAAAGGACGCAGATGGTTTTGTACAGCCTGATGCACGCGCTTACAACAATGCGACCGACATGGATGCTGCGCGCAGTCTTTATCGGAAAGCGCAGGAGCTTGGCATTCCACTTCGTATAGTGACAAAGGAGGCGGCCTATAAAACGGCGGTTTCGCCTTCATTTTACGAAGGGATAGCGGGGAGCGGACATCCAGTAGGCCACTACCTGAGAGACGTTCAGAAGAGTGCGTTGAAAGGCCTCTGGGAAGGTATTCAAGCTGGATTGCTTCCCGGGTTGGATGACTCATGGTTCTTTCGGACGTTCATGCCGAATGCACAGATTGAAGCAGCACAACTGGATAAAAATAAAGAGAGTTCGTTTGAAGATATCTGGCCTAAGGTGACGAAGCTAAACCTGTATGATCCTCTGACATTACTGGCCTCAGTGCCAGGGGCGGCAAAACTGCTATTTAAACCAAAAGCTATACACACAGAAGGATTTGGTCTTGTAGAGCAAGTAGGTCCAGATGATGTGACGCATCCAGAGAAAGCAAGGTTATTGATGTCCGCTTTAGCCAAATCTGCGCTTGCCCAGTCGACGGTAGCCCCAGATTGA
Protein sequence:
MHRPITAGHTTSRLILDQLKQISRTPSESSVQSALSQQASMSSPVLERSKSAPALLTAAQRTMLAQVGACNSHLTSDENMAINELRLHKPRLPKDTWFFTDPNKDPDDVVTYTLGKQLQAEGFVHITDVVATLGDAEVRSQRAEMAKGVFNKLGLHDVHVSRGRDYAMNSLQSKEHAKFLLEGHALRAGPGEIHRDSLQDMSRRLARAPHGVSIVVIAGMSDINALITTCPDMVRERVDDITIMGGVEPLKDADGFVQPDARAYNNATDMDAARSLYRKAQELGIPLRIVTKEAAYKTAVSPSFYEGIAGSGHPVGHYLRDVQKSALKGLWEGIQAGLLPGLDDSWFFRTFMPNAQIEAAQLDKNKESSFEDIWPKVTKLNLYDPLTLLASVPGAAKLLFKPKAIHTEGFGLVEQVGPDDVTHPEKARLLMSALAKSALAQSTVAPD
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
48796.6 447 6.58 -0.281 46.65
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.