Effector profile
| PlantPEAD ID: PlantPEAD16529 | Uniprot ID: A0A0S4WMC4 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 305 | Pathogen type: Bacteria |
| Species: Ralstonia solanacearum | Strain: Phyl III-seqv23 | Other name: Ralstonia nicotianae, Pseudomonas solanacearum |
| Gene name: | NCBI Gene ID: LN899827 | |
| Entry name: A0A0S4WMC4_RALSL | Protein name: Putative type III effector HolPtoQ | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAGCGCGTACCCGGCGTGTTCGCCAGCGCCATCTTGACCAGGCCGGACATCAGCTGCCGGGCGTCGGACGGGCAGTGCACCTCGTCCGCGCCGATCACCTCCACGAGGCCGCGGCCCGCGTCCTGCACGGCCTTCGGCCGGAACAGCATCTGCGCGGACGCGGGCACCGCGGCCAGCAGCGTCATCGGGTCGTACAGGTTCAGCCGGACGACCTGCTCCCAGATCGCGTCGAACGTGTGGTTGCGGGCCGCCCACGCCGCCGCGTCGCCCTGTCCGATTTCCCGGGCGATGAACGTATTGAAGAACCAGTGCTTGTCCAGTTTCGCGATCCGGCCCTGATCGATGCCGTCCCATAGCGTGTTGAGCGCATGCTTCTGGACGTCTTTCAGGTACTGCCCGACCACATGGCCTGACTGCGCCATGTCCTCATAGAAGGTGCGCGGCACCGCGGCCCGATATGCGGCTTCGCGGGTGACGATGCGCAGGGGGATGCCCAGTTCCTGCACGCGGCGGTAGAAGCGGCACGCCGCGGCGAAATCGGTCGTGTTGTTGTACGCGCGGTCGTCGGGCTGCACATAGCCGTCCTCGTCCTTGTCCGGCCGGACGCCCCCCATGATGACGACGCGGCCGACCTTCTGCTTGACCAGGCCGGGCTCGGCCGTGACCAGCGCGCAGGGGTCGGTCATGCCCGCGATCACAACCAGCGTGACCGGTGCCGCCGCCTGCGTGAGGCTCTCCCGCAGCGCGGCGACGCTGTCTTCGCTGGCGGCTTCCGGCTTGAGCTTGACGTGCAGTGCCTCGCCCTGGTCGAGGAACTTGGCGTGGTCCTTCGCGTGCTCCGGCTTGATGGCGTAGTCGAGGCCGACGGTGACCCGCACCTCCTGCAGATCGAGCCGGTCGAACACGCCCCTGGCCACACCGGCGCGCCGGGTCCGCACGTCGCGCTCGCCCAGCGTCGCCACCGCATGGGCCATCTTCACCAGGCGGAACGCCTGCAGCGGCTTGGCGAGCGTGAAGGCCACGACATCGTCCGGGTCCTTGTTGGGGTCCGTGAACAGGATGCACGGCATCGGTACCGCGGGCTTGTGCGACCTCAACTGGTTCAGGAGCTGCTGCTCGGCATAGTCCTCCGGTGCACCGTGGCTCCCCCAGAACGCGGTCAGCAGCGCCCGCCTGACGGCGTCGGCCGATGCCGGGCGGGTGCGGGGCAGGAGGCGGGCAGGGGCGGCCAGGCTTTCCATGGCCGGCAGGTGGAGTGCGCGTTCCGGGAGCACGACGCCGAGGCCGGTCTTGCTCAGTCCCGCCAGGGGTCCGCCGGCGGATGACTTGCCGGGCGGCTTTTGCTCGCCGGCTGTGCCTGGCGGCATGCTGTTGTGTGGTCGCAGCGGGTACGTTGTGGCATCCGTCTTGGCAGTGGCCGCAAGGTCGCGTAGGCCGGACGGATAGGCTGGTGATCGGGTGACGGCCTTCATCGCCAT
Protein sequence:
MAMKAVTRSPAYPSGLRDLAATAKTDATTYPLRPHNSMPPGTAGEQKPPGKSSAGGPLAGLSKTGLGVVLPERALHLPAMESLAAPARLLPRTRPASADAVRRALLTAFWGSHGAPEDYAEQQLLNQLRSHKPAVPMPCILFTDPNKDPDDVVAFTLAKPLQAFRLVKMAHAVATLGERDVRTRRAGVARGVFDRLDLQEVRVTVGLDYAIKPEHAKDHAKFLDQGEALHVKLKPEAASEDSVAALRESLTQAAAPVTLVVIAGMTDPCALVTAEPGLVKQKVGRVVIMGGVRPDKDEDGYVQPDDRAYNNTTDFAAACRFYRRVQELGIPLRIVTREAAYRAAVPRTFYEDMAQSGHVVGQYLKDVQKHALNTLWDGIDQGRIAKLDKHWFFNTFIAREIGQGDAAAWAARNHTFDAIWEQVVRLNLYDPMTLLAAVPASAQMLFRPKAVQDAGRGLVEVIGADEVHCPSDARQLMSGLVKMALANTPGTR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 53338.2 | 492 | 8.99 | -0.202 | 41.27 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR001910,IPR036452
Pfam: PF01156
SMART:
KEGG:
PRINTS: