Effector profile
PlantPEAD ID: PlantPEAD16530 | Uniprot ID: A0A0S4WSW5 | Source: Orthologous |
Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 305 | Pathogen type: Bacteria |
Species: Ralstonia solanacearum | Strain: Phyl III-seqv23 | Other name: Ralstonia nicotianae, Pseudomonas solanacearum |
Gene name: | NCBI Gene ID: LN899820 | |
Entry name: A0A0S4WSW5_RALSL | Protein name: Putative type III effector HolPtoQ | |
DOI: |
Gene/Protein information
Gene sequence:
TCAGCGCGTACCCGGCGTGTTCGCCAGCGCCATCTTGACCAGGCCGGACATCAGTTGCCGGGCGTCGGACGGGCAGTGCACCTCGTCCGCGCCGATCACCTCCACGAGGCCGCGGCCCGCGTCCTGCACGGCCTTCGGCCGGAACAGCATCTGCGCGGACGCGGGCACCGCGGCCAGCAGCGTCATCGGGTCGTACAGGTTCAGCCGGACGACCTGCTCCCAGATCGCGTCGAACGTGTGGTTGCGGGCCGCCCACGCCGCCGCGTCGCCCTGTCCGATTTCCCGGGCGATGAACGTATTGAAGAACCAGTGCTTGTCCAGTTTCGCGATCCGGCCCTGATCGATGCCGTCCCATAGCGTGTTGAGCGCATGCTTCTGGACGTCTTTCAGGTACTGCCCGACCACATGGCCTGACTGCGCCATGTCCTCATAGAAGGTGCGCGGCACCGCGGCCCGATATGCGGCTTCGCGGGTGACGATGCGCAGGGGGATGCCCAGTTCCTGCACGCGGCGGTAGAAGCGGCACGCCGCGGCGAAATCGGTCGTGTTGTTGTACGCGCGGTCGTCGGGCTGCACATAGCCGTCCTCGTCCTTGTCCGGCCGGACGCCCCCCATGATGACGACGCGGCCGACCTTCTGCTTGACCAGGCCGGGCTCGGCCGTGACCAGCGCGCAGGGGTCGGTCATGCCCGCGATCACAACCAGCGTGACCGGTGCCGCCGCCTGCGTGAGGCTCTCCCGCAGCGCGGCGACGCTGTCTTCGCTGGCGGCTTCCGGCTTGAGCTTGACGTGCAGTGCCTCGCCCTGGTCGAGGAACTTGGCGTGGTCCTTCGCGTGCTCCGGCTTGATGGCGTAGTCGAGGCCGACGGTGACCCGCACCTCCTGCAGATCGAGCCGGTCGAACACGCCCCTGGCCACACCGGCGCGCCGGGTCCGCACGTCGCGCTCGCCCAGCGTCGCCACCGCATGGGCCATCTTCACCAGGCGGAACGCCTGCAGCGGCTTGGCGAGCGTGAAGGCCACGACATCGTCCGGGTCCTTGTTGGGGTCCGTGAACAGGATGCACGGCATCGGTACCGCGGGCTTGTGCGACCTCAACTGGTTCAGGAGCTGCTGCTCGGCATAGTCCTCCGGTGCACCGTGGCTCCCCCAGAACGCGGTCAGCAGCGCCCGCCTGACGGCGTCGGCCGATGCCGGGCGGGTGCGGGGCAGGAGGCGGGCAGGGGCGGCCAGGCTTTCCATGGCCGGCAGGTGGAGTGCGCGTTCCGGGAGCACGACGCCGAGGCCGGTCTTGCTCAGTCCCGCCAGGGGTCCGCCGGCGGATGACTTGCCGGGCGGCTTTTGCTCGCCGGCTGTGCCTGGCGGCATGCTGTTGTGTGGTCGCAGCGGGTACGTTGTGGCATCCGTCTTGGCAGTGGCCGCAAGGTCGCGTAGGCCGGACGGATAGGCTGGTGATCGGGTGACGGCCTTCAT
Protein sequence:
MKAVTRSPAYPSGLRDLAATAKTDATTYPLRPHNSMPPGTAGEQKPPGKSSAGGPLAGLSKTGLGVVLPERALHLPAMESLAAPARLLPRTRPASADAVRRALLTAFWGSHGAPEDYAEQQLLNQLRSHKPAVPMPCILFTDPNKDPDDVVAFTLAKPLQAFRLVKMAHAVATLGERDVRTRRAGVARGVFDRLDLQEVRVTVGLDYAIKPEHAKDHAKFLDQGEALHVKLKPEAASEDSVAALRESLTQAAAPVTLVVIAGMTDPCALVTAEPGLVKQKVGRVVIMGGVRPDKDEDGYVQPDDRAYNNTTDFAAACRFYRRVQELGIPLRIVTREAAYRAAVPRTFYEDMAQSGHVVGQYLKDVQKHALNTLWDGIDQGRIAKLDKHWFFNTFIAREIGQGDAAAWAARNHTFDAIWEQVVRLNLYDPMTLLAAVPASAQMLFRPKAVQDAGRGLVEVIGADEVHCPSDARQLMSGLVKMALANTPGTR
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
53135.9 | 490 | 8.99 | -0.211 | 41.15 |
Plant infestation information
Experimental plant: | |
Susceptible plant: | Disease name: |
Host classification: | NCBI Species: |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR001910,IPR036452
Pfam: PF01156
SMART:
KEGG:
PRINTS: