Effector profile
PlantPEAD ID: PlantPEAD16534 Uniprot ID: A0A2K4U292 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. persicae strain ICMP 5786 Other name:
Gene name: NCBI Gene ID: RBRT01000063
Entry name: A0A2K4U292_9PSED Protein name: Type III effector HopQ1-1
DOI:
Gene/Protein information
Gene sequence:
ATGCATCGTCCTATCACCGCAGGCCATACCACCTCACGTCTCATCCTAGATCAGTCAAAACAAATATCACGTACCCCATCGGAAAGTAGCGCGCAATCAGCACTTCCTCAGCAAACAAGTATGAGCAGCCCAGTTCTGGAGCGGTCGAAAAGTGCGCCAACGTTATTGACTGCGGCACAGCGCACGATGCTTGCACAAGTGGGCGCATGCAACGCTCATCTGACCTCAGACGAAAACATGGCCATCAATGAACTGAGATTACACAAGCCCCGGTTACCTAAGGCTACGTGGTTTTTCACTGATCCTAACAAGGACCCGGATGATGTCGTGACCTACACCTTGGGCAAGCAATTGCAGGCTGACGGCTTTGTGCACATCACGGACGTAGTGGCAACACTGGGTGATGCTGAAGTTCGCTCTCAACGTGCCGAGATGGCCAAAGGCGTGTTCAACAAGCTTGAGTTGCATGACGTGCATGTCTCGCGTGGTCGGGATTACGCAATGAATTCGCTTCAGTCGAAGGAACATGCCAAATTTTTACTGGAAGGTCATGCTTTAAGGGCTGGACCTGGTGAAATACACCGCGACAGCTTGCAGGACATGAGCAGGCGCCTGGCCCGTGCGCCACATGGAGTCGGTATTGTCGTAATTGCAGGCATGAGTGATATCAATGCGCTCATCACTACCTGCCCGGATATGGTGCGCGAACGGGTTGATGACATCACCATCATGGGCGGCGTCGAGCCTTTAAAGGACGCAGATGGTTTTGTACAGCCTGATGCACGCGCTTACAACAATGCGACCGACATGGACGCTGCGCGCAGTCTTTATCGGAAAGCGCAGGAGCTTGGCATTCCACTTCGTATAGTGACAAAGGAGGCGGCCTATAAAACGGCGGTTTCGCCCTCATTTTACGAAGGGATAGCGGGGAGCGGACATCCAGTAGGCCACTACCTGAGAGACGTTCAGAAGAGTGCGTTGAAAGGCCTCTGGGAAGGTATTCAAGCTGGATTGCTTCCCGGGTTGGATGACTCATGGTTCTTTCGGACGTTCATGCCGAATGCACAGATTGAAGCAGCACAACTGGATAAAAATAAAGAGAGTTCGTTTGAAGATATCTGGCCTAAGGTGACGAAGCTAAACCTGTATGATCCTCTGACATTACTGGCCTCAGTGCCAGGGGCGGCAAAACTGCTATTTAAACCAAAAGCTATACACACAGAAGGATTTGGTGTTGTAGAGCAAGTAGGTCCAGATGATGTGACGCATCCAGAGAAAGCAAAGTTATTGATGTCGGCTTTAGCCAAATCTGCGCTTGTCCAGTCGACGGTAGCCCCAGATTGA
Protein sequence:
MHRPITAGHTTSRLILDQSKQISRTPSESSAQSALPQQTSMSSPVLERSKSAPTLLTAAQRTMLAQVGACNAHLTSDENMAINELRLHKPRLPKATWFFTDPNKDPDDVVTYTLGKQLQADGFVHITDVVATLGDAEVRSQRAEMAKGVFNKLELHDVHVSRGRDYAMNSLQSKEHAKFLLEGHALRAGPGEIHRDSLQDMSRRLARAPHGVGIVVIAGMSDINALITTCPDMVRERVDDITIMGGVEPLKDADGFVQPDARAYNNATDMDAARSLYRKAQELGIPLRIVTKEAAYKTAVSPSFYEGIAGSGHPVGHYLRDVQKSALKGLWEGIQAGLLPGLDDSWFFRTFMPNAQIEAAQLDKNKESSFEDIWPKVTKLNLYDPLTLLASVPGAAKLLFKPKAIHTEGFGVVEQVGPDDVTHPEKAKLLMSALAKSALVQSTVAPD
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
48766.6 447 6.58 -0.29 47.21
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.