Effector profile
| PlantPEAD ID: PlantPEAD16548 | Uniprot ID: A0A0U5F801 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 346 | Pathogen type: Bacteria |
| Species: Xanthomonas citri | Strain: pv. citri strain JP541 | Other name: |
| Gene name: | NCBI Gene ID: CCXZ01000004 | |
| Entry name: A0A0U5F801_XANCI | Protein name: Type III secretion system effector protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAGCGCGCGTGTTGCTCCTCGTCATCGTGGGCGAGCGCGGCCTTGGCCAGCGCCGACAGCAACAGCCTGGCTTTTTCCGGACGCACAACCTCGGCGTGGCCCACGTGCTCCACCGGGCTGGCGCCCTCGCGGTGCATGGGGGTTGGCTGGAACAGCAGGCGCGCAGTGCCGGGCAGCGCTGCCAGCAGGGTCAGCGGATCGTAGAGATTGAGCTTGGTCACCTGCGGCCAGATGGCGTCGAAGCTCATGGCGCCTTGCTGACCCGCTGCCACTGGATCCTGCGGTTGTGCTGCGACGAACGTACGGAAGAACCACGCCGTATCCAGGTCGCGGATCAGGTTGGCCTGGATGCCTTCCCACAGGCCTTTCAAGGCGTTTTTCTGGACATCGCGCAGGTACTCGCCCACGGGGTGGCCATTGCGTGCGATGCCTTCATAGAACGCGGGCGGTACGGCGGCCCTGTAGGCAGCTTCCTTGGTCAGGATGCGCAGAGGAATGCCGAGTTGCTGCGCGCGCCGGTAGAGCGCACGGGCGGCGTGGATGTCGGTGGCGTTGTTGTAGGGGCGCGCATCCGGTTGCACGAAACCATCGGCGTCCCTGGCCGGGTCGATGCCTCCCATGATGGTGATGGACGCGACCTTTTCCCGCACCAGATCGCCCGCCTCGGCGAGCAAGGCGCTGGCATCGGTCATTCCGGCGATGACCACCATGCCGAGCTTGTGGGGCGAGGTCGCCAGACGCTCGCGCATCGCACGGACGCCATCGGTGTGGACGGCGTCCGGCGCCGCACGCAGCGCGTCTCCCTCGGCGAGGAACTTGGAATGCTCCCGGGCCTGCGTGGACGTCATGGGATAGTCCTGACCGCGCGCGACGCGAACATCCGGCAATGCCAGGCGATCGAAGACACCCTTTGCCAGCTGCGCGCGTTGCGATCGCATGTCGGCATCGCCCAGGGTGACGACGACGTCGGTCAGACGCAAAAAGCCTTCGACCTGCAGCTGCTTGGCGATGGTGTAGGTCACGACATCGTCGGGGTCCCTGTTCGGGTCGGTGAACAGCAGCGTGTCGAGCGGCAGCTGCGGCCGGTGCAGGCGCAGCTCCCGCAGTACGGCCGCCTCGGTGGGCGTCAGCACGGGTGCGTCGGCGACGCCGAGTTCTGACAGCATGCTGCGCTGAGCAGGCGTCAATCGCGCGGGCAAGCTCTGCGTGCGTCGGTGCCGTGGTCCGTCCGGGCGGGGAGGACGGCCAATGATGGTCTGCAAGGCGCCCGGCGGCGGCGCGGCGGCGTCTGCGGGGGAATGTGCCGGCACGGCAACGGGTGGGGGATCGCGCAGGTCAACCGTCATGTCTGCGCTGGACAAACCGGCGGTGGATCGGATTCCGGTGGGCTGCAT
Protein sequence:
MQPTGIRSTAGLSSADMTVDLRDPPPVAVPAHSPADAAAPPPGALQTIIGRPPRPDGPRHRRTQSLPARLTPAQRSMLSELGVADAPVLTPTEAAVLRELRLHRPQLPLDTLLFTDPNRDPDDVVTYTIAKQLQVEGFLRLTDVVVTLGDADMRSQRAQLAKGVFDRLALPDVRVARGQDYPMTSTQAREHSKFLAEGDALRAAPDAVHTDGVRAMRERLATSPHKLGMVVIAGMTDASALLAEAGDLVREKVASITIMGGIDPARDADGFVQPDARPYNNATDIHAARALYRRAQQLGIPLRILTKEAAYRAAVPPAFYEGIARNGHPVGEYLRDVQKNALKGLWEGIQANLIRDLDTAWFFRTFVAAQPQDPVAAGQQGAMSFDAIWPQVTKLNLYDPLTLLAALPGTARLLFQPTPMHREGASPVEHVGHAEVVRPEKARLLLSALAKAALAHDDEEQHAR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 50244.4 | 464 | 6.68 | -0.242 | 40.19 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR001910,IPR036452
Pfam: PF01156
SMART:
KEGG: xcf:J172_04506,xcm:J164_04467,xcn:J169_04514,xcr:J163_04466,xcu:J159_04465,xcw:J162_04471
PRINTS: