Effector profile
PlantPEAD ID: PlantPEAD16582 Uniprot ID: A0A0P9N7M1 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. coryli strain ICMP17001 Other name:
Gene name: NCBI Gene ID: LJQC01000774
Entry name: A0A0P9N7M1_9PSED Protein name: Type III effector HopAA1
DOI:
Gene/Protein information
Gene sequence:
TTATGAGCGCCCTGGCTGGAACGGCACCGCGCTCGGTGAACCCGCAGCAATGCCACCCTCTTCGATGTCCGGCTCACGAGCATTGCGACGACGTAATGTGTCACGCAAGGATGCCCCCGTCGCAGCAATCGCTTCACCACTCGCGTCAATGCCCGCCTTGGCCAGCTTGACAGTCTGGTCGGCTACGTAGCTGGTCGAACTCGACGCCGCCGATTTGACCGTGTCCTGCAAGAACGACTCGGCTTTTCTTACTGCGGGATCGGTTGCGACCGCTGCGGTGGTCCAGGCCGCAAAAACGCCTGCCGAGCCGGCCATATTGGTCAGTTGGCTGACCGCCGCCTTGGTGGCCGGGTCAGTGATATTTTTGGTCGCCATCTCCTGTAATTTGCCCACGCCGGCAAAGCCGCCTGCCAGGGCCAGCCCGTTTTGCGCAAGACCGGTGGCCGACACCAGGCTTCTCACTGCTTTCAGGCCGTCGGTGGCGACGTCCAGCGGCAGACCCGCCACCCGCTTGCCGGCGTTCAGCGCCGCGCCGGCGTAGCTGGCTGACTTGATCGCATTGTAGGCATCGAGCCAGTCGGTTTCTTCACTCAAGTCTGCCTTGGGTTGCTTGTCCTTGATGCCGAGCACGAATGCACCGCCACGCAAGTGATCACGCGCCTGCACACTGAGCATCCGATTGCCGAACCCCGCGTTGGCCACCAGGCCGCCTGCCGCCGACACGCTGATGTCGACCGCACCCTGCACGGCGGGTCTGGATGCCAGTGCTGGCGCCAGTACGGTACGCACCGCATTACGCGCGCTGTAAGTCTGAACGGCAATGCCCAGATCGACCGCCTGACGCATGACACCCGGCGAATGACGCTTCACGGAAGCCGCCATCGCATCATGCAGTTTCTCAGGCGGGGTACTCAGGTAGTGCAGGTTGCCCGTGGCGCGATTCATGACCGTGGTGCCGACCTGATCCATGATCCCGGACAGCGCTCCGGACACAAATGGCGTCAGGGGTTTGAGCGGCGTCGGCAGCCAGTCGCCCTTGTTGATGGCAGGCTGCATGTATTGCAGCACCGACGCTGCGGCAAACGGCGTGGCGCGCAGCGCGGTCGAAGCGGTGGTTGCCATCCTGTCGAACTTCTCCGCCTTGGCGAAGGTGTCGGCAATAGTGGCAGGCGTTTCGCCCTCGTCCAGCAAACGTCTGGCGCGAGTATCGATGATGTTGTCGATCTGCTCGTTGTGCGCATGAACGGCATCCTGGTCGACGGTCGACTCACTCAACGGCAGTTTGTGCGCAGCGAACACATGATCTTTCAGGTAATCGGTAATGGAATCCAACATGGTCTGCTCGGCAGGGCTGAGCTCGCGCACGGAACTGGAGGCCAATGATTGCGATGCGGAATAAAAGCGCTCCAGCTCGATGCTGGGCTGCGGGCTGCCGGTTCGATTGATGTGCAT
Protein sequence:
MHINRTGSPQPSIELERFYSASQSLASSSVRELSPAEQTMLDSITDYLKDHVFAAHKLPLSESTVDQDAVHAHNEQIDNIIDTRARRLLDEGETPATIADTFAKAEKFDRMATTASTALRATPFAAASVLQYMQPAINKGDWLPTPLKPLTPFVSGALSGIMDQVGTTVMNRATGNLHYLSTPPEKLHDAMAASVKRHSPGVMRQAVDLGIAVQTYSARNAVRTVLAPALASRPAVQGAVDISVSAAGGLVANAGFGNRMLSVQARDHLRGGAFVLGIKDKQPKADLSEETDWLDAYNAIKSASYAGAALNAGKRVAGLPLDVATDGLKAVRSLVSATGLAQNGLALAGGFAGVGKLQEMATKNITDPATKAAVSQLTNMAGSAGVFAAWTTAAVATDPAVRKAESFLQDTVKSAASSSTSYVADQTVKLAKAGIDASGEAIAATGASLRDTLRRRNAREPDIEEGGIAAGSPSAVPFQPGRS
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
50313.7 483 7.15 -0.116 47.01
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.