Effector profile
PlantPEAD ID: PlantPEAD16684 Uniprot ID: A0A0P9HU20 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 86840 Pathogen type: Bacteria
Species: Pseudomonas cannabina Strain: pv. alisalensis ATCC BAA-566 / CFBP 6866 / ICMP 15200 / BS91 Other name:
Gene name: NCBI Gene ID: LJPP01000389
Entry name: A0A0P9HU20_PSEC1 Protein name: Type III effector HopAE1
DOI:
Gene/Protein information
Gene sequence:
TCAAACCCTGTCTGCGCCCGACGGCGATGCTTGCCCGCCAGTCGTTTGCGCGGCAACAGGCGTAGGGTGCGATCCGGTTATGTACCGGAAGCTTCCATAGAGGCTCGCCACCATTTGCCCGCCTGCGGCCCTTCCGGGAACGGCCGCCTGCAGCGCGCCGACTGCGCCACCCAGCCGCGATGTGCTGACGTAATTCACGGCCCATGAGGCTGCCGCTTTGCCAGCCTGGTGTGCCGCCTTGCCCTTTTCGGTCATGTAGCTCAAGCCCTTGCCGGCAGCCGAGCCTGCCACTTCACCGACCATGCCGGGCAATGTGAGGTTGGCGGCGGTCAGCACTGCCGCACCGGCGGCATAGCCTTTCAACCCTTTGTCGAGGAAGTTCCAGGCCTTGTTGACCCCCAGGAACCCAGTCATCACCAGGTTCAGCCCGACGATTTCCTTGAAGACCTGAACCGCCTTCTGCATGTCGACGTCAGGGTTTATCGCCATTTTGAGCATTTCCGAAGCGCACCACACGCCGTCCGCTGCGTAGTCGGCTTTACCAACCATGCTTTTCATCAGCATCACCAGCGCAGCACCGATCCCCGCAGTCAGGGCAACCAGGCCCATTTTGGGGTAGAAATCCGCGTCCGCCTTGCGCTCGGTCTCAGGCAATGCCTGGCGTGTGCGCATGGCCTCGCCTGCTTCAAAGGCAGCCTTGAACTCACTGCTCTTGGTGCCCAGGTACGTCAGGCTCGAGTTCATGATGTCGGTAATGCTGTTGTCTTGCTTGTAAGCTTCGGTCGCGACTTTCATCTGCTGAGCGAAATGCTCACTGACGTTGAAGTGATTGACCACTGCACTGTGGTCCTCCTCGGAAATGTCGGCATCCCCCGGGTCCTGCCTGGAGAGCTTGCTTTTCGCGAGCTTGAAGGCCGACGCTATCGACTCCCGGTTGAACACTGCCAGCGTGGCGGCGCCGGACGTCACGGCGGTTGCGATGCCGAAACCGACCTGTTCCAACAGCTTTTCGTTCTTGGCAAAGGTGGGCTGCGCCACGATGGCGTTGGCCAGCACCGTGACAAAATAGCGGTTGAGCCCGTGGTCGATGTTGGTTCGGGTGTTGGTCAGCTCGTTCATCATCAGGCCGGCCATGAACACCGCATTCTTGGTGAAGTGTGCAACCAGCGATGAACTGTAGGAATTGTCCTTGCTGACGAACGCCACTGCCAGGGGCAACGGCGCCAGGGCCAGCAGCATCGCCGGACTCGCGGCAACGCGGCTCATGAACGAGGCGCCGCTCTTGAGTGTCGCCAGCTCGGTGTTCATGCTCTTGTTGAGGCTGAGCAATTCGTCGCGCACGTGAGGCGGGAGCCCCGACCGGTTCAGGACCTCGGGCAAGCGCTCGTTATGCGCGTGCCAGGCCTCGAGCTGCCCTTGGCTGTTGGCATCGATGATCGCGTCAAGCATTTCCCGCTCTGTTTTGCTCAGCGCAGACGACGGTTTATCCAGCAGCGTCTTCAGCCCCTCGGACGTCGTGCTCGTCGCCTTGGGCTGATTTTCAAGATCGGCCAGTTGCTCGTCGGTCAACACCAGCGAACCATCGGCCAGGGCCAGACGAAACTTTTCGTCGAACCCCCTGCCACACTGCGCCTCGATGTCGCCATCGCGGGCAGGAGGCAGCTCAGTATTGCTGACAATCGTGCGCTGCTCGTCAGTGAGCTGAATCGCATGCCTGTTCAGAAATGCGTGCATCTGCGCGGGCGAAAGGTGCGGTGCCGGAGTACGCAACAAGGCCAGCAGTTTTTTGTCGTCCATGGGCGCAACCGCTCCGTAGGCATCGAACTTGCGCACCAGCTTGCCGCCCGCCTTGAGCAACGCCTGGCTCCGCGTCAGCGCGGGCTTGACGCTTTCACGACTGTGTACCGGGCTTTCCCCGGCCTCGCTGACGATCTCTTCCGAGCCTTTCAAAAGAGCGTTTTTACGCAACGTTGTCAGCAACTCACCCGCCGCGTCCTCAAGAGAGCGCAAATCTTTCTGGGTGGGCGTATCCGGGCAATGCTCGATCAAAGCCGCCAGGATGGCTGGCAGCTTCTTCAGCGCCTCGAGCGTGTCGGCCTGCGCGCGGAGCAGACCGGTCGTTTCCCCGGCAGGATCACTCAGGCTTACGTTTAGCGCCGCCGTGCTATCCCTGGCCGTGCGAATGAAACGGCCAAACGATTCGTAAGGTGCCTGCCCGTCAAGCTTCTCGGCCAGCACCTTTGGATCAAGCTGAGTCAATGCCAGCAGATCCGCCACACCTCGTGTTTGAGTGTGCGACGTGCCGGTCAACATCGCGAGAGACTGATGCAGCCGCGCCGTCTTCAGTGCTTCGCAGGCCTGGGACAGAGGTACATGGGACGCCTCAGACGCAGGCGTATCCGCCAACTGGCGCATGCAACGATCAAGCACGTGTTTCAACACGTGCTGGTGTTCTTCGGTGGCCAGCAGGTTCGAGCCCTGCTCGGTCATCGCGGCAGCGGCGAGCTCTTTGCCCAGCAGGGCAAGCTCGGGACCAGACGGATTCTCTTTCGCCAGCTCGCGCTGAAGATTGTTCAGCACAAGCACCGCATCCTGCGCCGGCGCGGTAGACGTGCGCCCGAATGCCTCAGACAGTTCAGCTTTGGTGATAAACGCCCTGGTGCGGAGCTGCTGCGGCGATTGCTCAAGGCTGCTTGCGGCATCGCAAGCCGGGTGAGAGGCACCCGGCAAGGATGAATGAGAGGAGCGCGTGATCGGAGATGGCATCATGGCTTTTTCCCTACGGTCGGTGGTTCCGATAATCAAAGGTCGGGGCTGAGTGGCGCTCGGTCCGGAACGGTTCCCGATGACAGGGGAAAAATCGACGCACGACCGTTCGGCGGTCTGTGGCGGAGGGTCAAGAAATGTATGCCTGCGCGATATTGATCTGCGTCTCAG
Protein sequence:
MRRRSISRRHTFLDPPPQTAERSCVDFSPVIGNRSGPSATQPRPLIIGTTDRREKAMMPSPITRSSHSSLPGASHPACDAASSLEQSPQQLRTRAFITKAELSEAFGRTSTAPAQDAVLVLNNLQRELAKENPSGPELALLGKELAAAAMTEQGSNLLATEEHQHVLKHVLDRCMRQLADTPASEASHVPLSQACEALKTARLHQSLAMLTGTSHTQTRGVADLLALTQLDPKVLAEKLDGQAPYESFGRFIRTARDSTAALNVSLSDPAGETTGLLRAQADTLEALKKLPAILAALIEHCPDTPTQKDLRSLEDAAGELLTTLRKNALLKGSEEIVSEAGESPVHSRESVKPALTRSQALLKAGGKLVRKFDAYGAVAPMDDKKLLALLRTPAPHLSPAQMHAFLNRHAIQLTDEQRTIVSNTELPPARDGDIEAQCGRGFDEKFRLALADGSLVLTDEQLADLENQPKATSTTSEGLKTLLDKPSSALSKTEREMLDAIIDANSQGQLEAWHAHNERLPEVLNRSGLPPHVRDELLSLNKSMNTELATLKSGASFMSRVAASPAMLLALAPLPLAVAFVSKDNSYSSSLVAHFTKNAVFMAGLMMNELTNTRTNIDHGLNRYFVTVLANAIVAQPTFAKNEKLLEQVGFGIATAVTSGAATLAVFNRESIASAFKLAKSKLSRQDPGDADISEEDHSAVVNHFNVSEHFAQQMKVATEAYKQDNSITDIMNSSLTYLGTKSSEFKAAFEAGEAMRTRQALPETERKADADFYPKMGLVALTAGIGAALVMLMKSMVGKADYAADGVWCASEMLKMAINPDVDMQKAVQVFKEIVGLNLVMTGFLGVNKAWNFLDKGLKGYAAGAAVLTAANLTLPGMVGEVAGSAAGKGLSYMTEKGKAAHQAGKAAASWAVNYVSTSRLGGAVGALQAAVPGRAAGGQMVASLYGSFRYITGSHPTPVAAQTTGGQASPSGADRV
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
104126 978 6.95 -0.182 39.25
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.