Effector profile
| PlantPEAD ID: PlantPEAD16728 | Uniprot ID: A0A1X0N2U7 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1958950 | Pathogen type: Bacteria |
| Species: Pseudomonas floridensis | Strain: GEV388 | Other name: |
| Gene name: | NCBI Gene ID: MUIO01000090 | |
| Entry name: A0A1X0N2U7_9PSED | Protein name: Type III effector | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGGCAACATCTGTCATTCGGGAGGCGTCAGTCGAACCTATAGCCCTCCGGCAAGTCCCGTGTATGGATCGGGTGTAAGCTCACCCTCGCGGTTCGTTGGACAATACACGCTGACTTCCATCCACCAATTGTCCAGCGAGGAGAGGGAAAATTTCCTCGACGCGCATGATCCTATGAGGGTTTACGACTTAAACAGTGAGACGTCAGTCTATCGCACGACCCCGAGAGAATACGTGCGCAATGGGTATGCAACCGGGAATCCAAATTCAGGTGCTATTGTCGCACTTCATGAAGAGTTACAAGAAAGCCCCTATGCCCAGCATATTGGAGCGAGACCTGACCAGGCCGATGCCTACAGGCCTCGAATAGCACATGCATCCTCGTTGAATACGCCGTCCCTGAATGTCATGGCGGGTCGGGGCGCGCTCGGGGCTCTCAGTCATTACGCACGTTCCGATCATGTAACTACTGAAATGAGACTGGGCGACTTTCTGAATCAAGGAGGCAAGGTCTACAGTGATAACTCTGCGATGAGCGCAGGGGGGGACAGGGTAGAGGCGCTGATCGTGACATTGCCTAAAGGCCGAAAAGTACCAGTCAATATCCTCGATTAG
Protein sequence:
MGNICHSGGVSRTYSPPASPVYGSGVSSPSRFVGQYTLTSIHQLSSEERENFLDAHDPMRVYDLNSETSVYRTTPREYVRNGYATGNPNSGAIVALHEELQESPYAQHIGARPDQADAYRPRIAHASSLNTPSLNVMAGRGALGALSHYARSDHVTTEMRLGDFLNQGGKVYSDNSAMSAGGDRVEALIVTLPKGRKVPVNILD
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 22021.4 | 204 | 6.44 | -0.484 | 47.55 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR015226
Pfam: PF09143
SMART:
KEGG:
PRINTS: