Effector profile
| PlantPEAD ID: PlantPEAD16762 | Uniprot ID: A0A1Z3M0L5 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 293 | Pathogen type: Bacteria |
| Species: Brevundimonas diminuta | Strain: BZC3 | Other name: Pseudomonas diminuta |
| Gene name: | NCBI Gene ID: CP021995 | |
| Entry name: A0A1Z3M0L5_BREDI | Protein name: LysM domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTCTTTCGCCGCTTCCTCCGCCACCAGCCTGTCCTCCGCCGCCGGGGCGCGCGACGCTGCGCCCGCCCACACGGTCCGGGCGGGCGAGACCCTGTCCGGGATCGCCGAACGCTATGGCGTCAGCGTGGGCGACCTGCTGGCGGCGAACCGCCAGATCACCAATCCGAACGTGATCCATCCCGGCCAGACCGTGACGCTGCCGGTCGGCGCGGGGGAGGGGCGAGACTCGACGCCGGCCGAGGCGACGGTCTTTCATACGGTGCGCGGCGGCGACACCCTGTCGGGCATCGCCCAGCAATACGGGATGAGCTGGCGCGAGCTGGCGGCCGACAACGGGATCGCCAATCCATCGCGGATTCAGGTCGGCCAGCAAATCCGTCTGAACGGCGCGGCGCCCGAGGCGGCGACGCCGGTCCAGTCGACGCCCGTTTCCGAACCCGCCGCTGAAGCGACGCCCGCGACGGCGCAGGAAGGCGTCAATCCGGACCTGGGCGCCCTGTCGGCGCGCTATGAAACGGGCGGGCGCGGTCCCGGCACGGTGTCGTCCGGTTCGGGCGATCCGGGCGGCGTATCCTACGGCTCCTATCAGCTGGCGGTGAACCGCAACCGACCGCAGGAGTTCCTGGCCGCCGACGGGGCGCGCTGGGCCGATGAGTTCGGCGGGGCGGCGGCGGGCACGCGCGCCTTCTCCGACACCTGGCGCGCCATCGCCGCGCGCGAGCCTGAAGCCTTCCAGGCGGCGCAGCACGCTTTCATTGAACGCACCCACTATGACGTGCAGTCCGCCCGGATCGGGAATGCGGGCCTGGACATCTCCAACCGCTCGCACGCGCTTCAGGACGTGGTGTGGTCGACCTCGGTCCATCACGGCCCGAACACGGCGGTCGTCACCCGCGCCATGGCGGCGGTCGAGCGCCAGGGGATCGACGCCTCCAGCGCCGACTATGATCGCGCGCTGATCAACGCCGTCTATGACGAGCGCGGCCGCCGCGACGGCAACGGCGAACTGGCCTACTTCTCCAGCTCGCGCGCCGATGTCCAGGCGGGCGTGGCCCAGCGGTTCGAGGACGAGCGCCGCGACGCCCTGAACATGCTGGACGGCCGCTGA
Protein sequence:
MSFAASSATSLSSAAGARDAAPAHTVRAGETLSGIAERYGVSVGDLLAANRQITNPNVIHPGQTVTLPVGAGEGRDSTPAEATVFHTVRGGDTLSGIAQQYGMSWRELAADNGIANPSRIQVGQQIRLNGAAPEAATPVQSTPVSEPAAEATPATAQEGVNPDLGALSARYETGGRGPGTVSSGSGDPGGVSYGSYQLAVNRNRPQEFLAADGARWADEFGGAAAGTRAFSDTWRAIAAREPEAFQAAQHAFIERTHYDVQSARIGNAGLDISNRSHALQDVVWSTSVHHGPNTAVVTRAMAAVERQGIDASSADYDRALINAVYDERGRRDGNGELAYFSSSRADVQAGVAQRFEDERRDALNMLDGR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 38472.9 | 369 | 5.23 | -0.402 | 32.18 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR018392,IPR036779,IPR049073
Pfam: PF01476,PF21277
SMART: SM00257
KEGG:
PRINTS: