Effector profile
| PlantPEAD ID: PlantPEAD17027 | Uniprot ID: A0A1H0Z2M8 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 286 | Pathogen type: Bacteria |
| Species: Pseudomonas | Strain: sp. UC 17F4 | Other name: |
| Gene name: | NCBI Gene ID: FNKV01000001 | |
| Entry name: A0A1H0Z2M8_9PSED | Protein name: Type IV pilus assembly protein PilQ | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAACGACTCACAGCAATCGCCTGGTCACTCATGATACGCGGAGTCAGGAAGACCAGCAGCTCGGATTTTTTCTCTTGTAGAACATCGCGACGAAACAGCCGCCCAACATACGGCACATCGCCGAAAAATGGCACCTTGTCGACAACTTTACTTTGCACCGTCGAGTACACGCCGCCGATGACGATGGTCTCGCCATCATTGATACGCACCTTGGCGTTGACCTCGTTTTTACGGATCGCCGGCACGTGATCCAGGGCGTTGAGGTAGTCGGGCTCGTCCTTGGTCACCTTGACCACCATGATTACCCGGTTGTCCGGGGTGATCTGCGGGGTGACCTCAAGGGACAGCGAGGCCTCGCGGAAGGTCACCGAGGTAGCGCCGCTGCCGCTGGTTTCCTGATACGGCACCTCGGTGCCCTTGAGGATCCGCGCAGTTTCCTTGTCAGCGGTGACGACCTTGGGCTGGGAAATGATTTCGCCGTTGCCGGTGCGCTCCATGGCGCTCAGTTCCAGGTCGAGCAGCGCACTGTTGCGCACCAGGCCAAAGCCGATACTCGACGATGCCCGGTCCGCGCCAAGGTCGACGAAGGTATCGCCACCACCCAGGCTCAAGCCCTTGCCCAACTGCACCTGGCCACCCCAGCGCACACCCAGGCTCTTTTCAAAATCGACGTTGGCCTCGACGATCCGCGCCTCGATCATGACCTGGCGTACCGGCACATCGAGTTCGCCGATCAACCTGCGCAGCTCTTCCAGACGTTCCGGCGACTGGCTGGCGACCAGGGTGTTGGTGCGCTCATCGACACTCAGCGAACCATGGCTGGCGCCGCCGGCCTCATGGGCCATCAGGCTGTGGAAAAGCTCGGCGATATCGGTGGCCCTGGCGTGGTGGATCGGTATCAGCTCGCGCCGCGACGGCGCGGACCCGGCCAGTTCGGCAAGCGGTGCGACCAGCAATACATTGCCATCCTTGCGCTGCTCCAGGCCCTTGCTGCGCAGCACCAGCTCCAGCGCCTGGTCCCAGGGCACATCCTGCAAGCGCAAGGTCACCTTGCCCTGCACCGCATCACTGGCCACCAGGTTGACCCCGGAAAAATCAGCCAGCACCTGCAGTACCGTACGCACCTCGACATCCTGAAAATTCAATGACAACGGCTCACCGCCGTACTGTTGCTTGCCCGCAAACGCGCCGGCAGACAGGCAACAGCCTATCAGCGCCCCAACCACAGCCCCCTTGCCCAT
Protein sequence:
MGKGAVVGALIGCCLSAGAFAGKQQYGGEPLSLNFQDVEVRTVLQVLADFSGVNLVASDAVQGKVTLRLQDVPWDQALELVLRSKGLEQRKDGNVLLVAPLAELAGSAPSRRELIPIHHARATDIAELFHSLMAHEAGGASHGSLSVDERTNTLVASQSPERLEELRRLIGELDVPVRQVMIEARIVEANVDFEKSLGVRWGGQVQLGKGLSLGGGDTFVDLGADRASSSIGFGLVRNSALLDLELSAMERTGNGEIISQPKVVTADKETARILKGTEVPYQETSGSGATSVTFREASLSLEVTPQITPDNRVIMVVKVTKDEPDYLNALDHVPAIRKNEVNAKVRINDGETIVIGGVYSTVQSKVVDKVPFFGDVPYVGRLFRRDVLQEKKSELLVFLTPRIMSDQAIAVSR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 44438.7 | 413 | 5.47 | -0.033 | 31.6 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR001775,IPR005644,IPR038591,IPR013355,IPR011662,IPR004846,IPR004845
Pfam: PF00263,PF03958,PF07660
SMART: SM00965
KEGG:
PRINTS: PR00811