Effector profile
| PlantPEAD ID: PlantPEAD17054 | Uniprot ID: A0A2N5FAC5 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 286 | Pathogen type: Bacteria |
| Species: Pseudomonas | Strain: sp. QC2 | Other name: |
| Gene name: | NCBI Gene ID: PKKS01000002 | |
| Entry name: A0A2N5FAC5_9PSED | Protein name: Type IV pilus secretin PilQ | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGCTGTTGCTATGCCCAATCGCGTAGACCTGATCCAGTTGCCGCCCCCCGCTAGCGCCACAGTGGGCGCCTACAAAGGGGACAGGCTTAACCTCAACTTCCAGAGCATCGAGCTGCGCACCGCGCTGCAGCAAATTGCCGATGTGGCGGGCCTCAACCTGATCGCCAGCGACGATGTGCAGGGCTCGATCACCCTGCGCCTCAAGGATGTGCCCTGGGACCAGGCGCTGGACCTGGTGCTGCAAGCCAAAGGCTTGGATAAGCGGGTCAAGGCCGGCGTATTGCTGGTGGCGCCCGCCGAAGAGTTGGCTGCGCGTGAGCTGCTGACCCTCGAGTCGCGCAAGCAAATGGCTGAACTGGCGCCCTTGCGGCGGGAGCTGCTGCAAGTCAATTACGCCAAAGCGGCCGACTTGGCCAAACTGTTCCAGTCGGTCACCGGCCTTGAGGGCGTCACCGACGAGCGTGGTTCGGTAGCCGTCGATGACCGCACCAACAACATCATCGCCTACCAGACCGGGGAGCGTTTGGAGGAGCTGCGGCGGATCGTGGCACAGCTGGATATTCCGGTGCGCCAGGTCATGATCGAGGCGCGGATTGTCGAGGCCAATGTCGATTACGACAAAAGTCTGGGCGCACGCTGGGGTGGGCGACTCAACCGCGGTAACTGGGGCGCGGGCGGCATTCCCAAACCTCAACCTGAAGGCGCGGAACCGCCGGAAAACCCGCCCAGTTCGCCCTTTGTCGACTTGGGTTCGCTGACGGGCACCTCGGGCCTGGGCATCGCCTTTATCACCGATAACCTGCTGCTGGACCTGGAGCTGACCGCCATGGAGAAAACCGGCAACGGTGAAATCGTCTCGCAACCCAAGGTGGTCACGTCTGACAAGGAAACCGCGCGCATCCTCAAGGGCACCGAGATCCCCTATCAGGAATCCAGCTCCAGTGGCGCCACGTCGGTGTCCTTCAAGGAGGCTTCGTTGTCGCTGGAAGTCACCCCGCAGATCACCCCTGACGACCGGGTGATCATGGAGGTCAAGGTCACCAAGGATGAGCCTGACTACCTCAACAAACTCAACGATGTGCCGCCGATCAAGAAAAACGAGGTCAACGCCAAGGTGTTGGTCAAGGACGGCGAGACCATTGTCATCGGCGGGGTTTTCTCCAATACCCAAAGCAAAGTGGTAGATAAAGTGCCATTTTTGGGCGATGTGCCGTATCTTGGCCGCCTTTTCCGGCGCGATGTGGTGGCGGAGAAAAAATCCGAGCTGCTGGTATTCCTGACTCCGCGTATTATGAATAACCAGGCGATTGCTGTGAGTCGTTGA
Protein sequence:
MAVAMPNRVDLIQLPPPASATVGAYKGDRLNLNFQSIELRTALQQIADVAGLNLIASDDVQGSITLRLKDVPWDQALDLVLQAKGLDKRVKAGVLLVAPAEELAARELLTLESRKQMAELAPLRRELLQVNYAKAADLAKLFQSVTGLEGVTDERGSVAVDDRTNNIIAYQTGERLEELRRIVAQLDIPVRQVMIEARIVEANVDYDKSLGARWGGRLNRGNWGAGGIPKPQPEGAEPPENPPSSPFVDLGSLTGTSGLGIAFITDNLLLDLELTAMEKTGNGEIVSQPKVVTSDKETARILKGTEIPYQESSSSGATSVSFKEASLSLEVTPQITPDDRVIMEVKVTKDEPDYLNKLNDVPPIKKNEVNAKVLVKDGETIVIGGVFSNTQSKVVDKVPFLGDVPYLGRLFRRDVVAEKKSELLVFLTPRIMNNQAIAVSR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 47929.9 | 441 | 5.1 | -0.165 | 35.83 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR001775,IPR005644,IPR038591,IPR013355,IPR011662,IPR004846,IPR004845
Pfam: PF00263,PF03958,PF07660
SMART: SM00965
KEGG:
PRINTS: PR00811