Effector profile
| PlantPEAD ID: PlantPEAD17073 | Uniprot ID: D4GCM5 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 553 | Pathogen type: Bacteria |
| Species: Pantoea ananatis | Strain: strain LMG 20103 | Other name: |
| Gene name: HofQ | NCBI Gene ID: CP001875 | |
| Entry name: D4GCM5_PANAM | Protein name: HofQ | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTATCGTGCCGAAAGCGCTGCTTCCCTGACCAATCGCGGCGTCATGAAAATGACCAGCTCACGTTTTCTCTGCTCTTCTGCATGCTGCCGAAACAGGCTGCCCACAACAGGAAGATTACCGAGCAGCGGAACCTGGCGCTGCCCGCGAGTGCGCTGCTGATGAAAAATTCCCCCCAGCGCCAGCGTTTGCCCGTCACTGACCGTGACCTGAGTTTCAATTTCCTGCTTATCAATGGACAAAACCTGTGAATCGCCGGTCTGAACCGCCCGACCCGGCACGTTCTGACTGATGCGTATTTTGAGCTGAATGCGGCCATTGCCTAAAACGGCAGGCGTGACCTCCATGCCCAGCACTGCCTCTTTGAACTCAATGCTGGTCGCTCCGCTGTTGCCGGCAGAGACTTCATAAGGGATTTCAGTGCCTTGCTTAATGGATGCCGTTTGTTGGTGGGAGGTAAACAAGCGCGGGCTGGCGATAATTTCCACCTGATTTTCCTGCTCCAGAGCGCTGAGTTCTAAATCCAGAAGTTTGCCACCAATCCGCGACAGCGTGACGCCCACAGACACGTCGTGGGAATTCAGCCCCAATGGAATATCAAGTAAAGGATGACGTAATGCACGATTTATGACGTCGCCTTCGTTATACAGCCGCCAGTTGACGCCCAGTTCATGCAAGTGCTCTTCGCTGATGGTGACGATATGCGCCGCCAGTTCCACCTGCTCCAGCGGGACATCCAGCGCACGTATCCAGCGCGCAGTCTCCTCAAGCGCCAACGGGCTGTCGCGCAGCAGTAGGCTGTTGGTCCGGCTGTCAACCGTTGCACTGCCGCGCGCGGTCATCAGCGATGGCCGTTCACTCTGCAGGCTGCGATGGACGTCGCTGGCACTGGCATAGTGCAGGGAGATCCTGCGTTGTTGCAGCGGCTGTTGCTGTAACGCTTCGGCCTGTTGAGCCTTTTCGGCCTCATGCCGTTGCTGCTGCCAGCTCTCAGGATAAACCAGCAGAACGTTCTCCTCTTCCAGTAAGGTCAGGCGAGCCATACGGCCGACCAGCGACAGCGCCTGTTGCCAGGGTACATTCTCCAGCCGCAATGACAGTCTTCCCTCAACCTCAGGCGAAATCATCAGGTTAATGTGCTGATAATCAGCCAGCGCCTGCAAAACGCGTTCAACAGGTGCATCGTCAAATGCCAGGCTTAAGCCGTCATCGTGGCTGGCGTGAGCGGGCATCAGGCAGAGCAC
Protein sequence:
MLCLMPAHASHDDGLSLAFDDAPVERVLQALADYQHINLMISPEVEGRLSLRLENVPWQQALSLVGRMARLTLLEEENVLLVYPESWQQQRHEAEKAQQAEALQQQPLQQRRISLHYASASDVHRSLQSERPSLMTARGSATVDSRTNSLLLRDSPLALEETARWIRALDVPLEQVELAAHIVTISEEHLHELGVNWRLYNEGDVINRALRHPLLDIPLGLNSHDVSVGVTLSRIGGKLLDLELSALEQENQVEIIASPRLFTSHQQTASIKQGTEIPYEVSAGNSGATSIEFKEAVLGMEVTPAVLGNGRIQLKIRISQNVPGRAVQTGDSQVLSIDKQEIETQVTVSDGQTLALGGIFHQQRTRGQRQVPLLGNLPVVGSLFRQHAEEQRKRELVIFMTPRLVREAALSAR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 45909.1 | 413 | 5.65 | -0.246 | 49.59 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR001775,IPR005644,IPR038591,IPR011662,IPR004846,IPR004845
Pfam: PF00263,PF03958
SMART: SM00965
KEGG: pam:PANA_3669
PRINTS: PR00811,PR01032