Effector profile
| PlantPEAD ID: PlantPEAD17081 | Uniprot ID: A0A0H3IA02 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1905730 | Pathogen type: Bacteria |
| Species: Pectobacterium parmentieri | Strain: SCC3193 | Other name: |
| Gene name: | NCBI Gene ID: CP003415 | |
| Entry name: A0A0H3IA02_PECPM | Protein name: Protein transporter HofQ | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCACGATGAGGCAGGTATCAACGTCGGTGTAATGAAAATAACCAATTCTCGTCGCGTATGCTGCTGAGTATGGTTTCTGAACAGATGACCAAATACGGGAACCTCACCCAATATTGGCACCTGACTGCCACTATTCTTTTTTTGCTGCTGGAAAATGCCGCCTAATACAATAGTTTCTCCATCAGCGACCGTCACCTGAGTTTGGATTTCCTGTTTATCGATCGCTAACGCTTCGCCATTATCGCCTTGCTTAATCGTCTGTCCCGGCATGTTTTGACTGATTTTCAGGTTCAGCGTAATGCGTCCGGCACGCAGAATGTCGGGCGTCACTTCCATACCGAGCACCGCTTCTTTAAACTCGATGGAGGTCGATCCGCTAGCACCGCTGGAAACCTGATACGGAATTTCCGTTCCCTGCTTAATACTGGCGGTCTGCTGGTGTGCAGTAAACAGGCGGGGGCTGGCGATAATTTCAACCTGACTTTCCTGCTCCAGCGCCATTAATTCCAGATCCAGCAAACGGCCATTCAGTCTCGCCAAATGGAACCCCGCATTGACTGCTGGCGTGTCTACCGGCAGGCCAACATTAAAATTATTCAGCCTGAGTGCCTTGTTCGCCGCGTTTCCTTCCCCCAGCCCCCAGTTAACCCCCAGCGCCTGTAGGTGTTCGCTGCTGATAGTGACAATATGCGCCGCCAGTTGCACCTGCGCTAACGGCAAATCGAGCTCCTTTAACCACGGTTCGAGCTGTGCCAACGCGTCTTCCGTATCGCGAATCAATAAGGTATTCGTCCGTTTATCCACGGTTACGCTGCCACGTGTAGAAAGCAGGGCTCCACGCTGGGCCTGAACGCTGGCCGCTACGTCAACCACATCAGCATACTGCAACGCGACAGAGAGGTTATGTAGCGGCAGTTTCTGCGCCAACTCCACCATGCGTTCATCCTTTTCCTTCTGTTGGGACGCAAGATGTTCAGCAGGGAAAACCAGCAGCACATTTCCGTTGCGCTCGACGCTCAGTTTCCCCATGCGTAAAACAATATCCAGCGCTTGCTGCCAGGGAACCTCTGCCAGTCTCAGGCTCAGATTTCCCGTCACACCCGGCGCGATGACCACATTGAGCTGTTGGTGATCGGCTAACGCCTGTAGCACCTGGGGTATTGGCGAATTCTCAAAAGCCATCGATACCGAAGGTTCAGCCCCGACCTGATACGGTACGGTGAGAAGCAGTAGCCAACCCAACGTCGCCACGCGACATAACATTCTTATATTCAT
Protein sequence:
MNIRMLCRVATLGWLLLLTVPYQVGAEPSVSMAFENSPIPQVLQALADHQQLNVVIAPGVTGNLSLRLAEVPWQQALDIVLRMGKLSVERNGNVLLVFPAEHLASQQKEKDERMVELAQKLPLHNLSVALQYADVVDVAASVQAQRGALLSTRGSVTVDKRTNTLLIRDTEDALAQLEPWLKELDLPLAQVQLAAHIVTISSEHLQALGVNWGLGEGNAANKALRLNNFNVGLPVDTPAVNAGFHLARLNGRLLDLELMALEQESQVEIIASPRLFTAHQQTASIKQGTEIPYQVSSGASGSTSIEFKEAVLGMEVTPDILRAGRITLNLKISQNMPGQTIKQGDNGEALAIDKQEIQTQVTVADGETIVLGGIFQQQKKNSGSQVPILGEVPVFGHLFRNHTQQHTRRELVIFITPTLIPASS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 46063.9 | 424 | 5.73 | 0.015 | 32.86 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR001775,IPR005644,IPR038591,IPR011662,IPR004846,IPR004845
Pfam: PF00263,PF03958
SMART: SM00965
KEGG: pec:W5S_4220
PRINTS: PR00811,PR01032