Effector profile
PlantPEAD ID: PlantPEAD17082 Uniprot ID: A0A8B3FIM8 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 1905730 Pathogen type: Bacteria
Species: Pectobacterium parmentieri Strain: IFB5626 Other name:
Gene name: NCBI Gene ID: PSZG01000001
Entry name: A0A8B3FIM8_PECPM Protein name: Type IV pilus secretin PilQ
DOI:
Gene/Protein information
Gene sequence:
TCACGATGAGGCAGGTATCAACGTCGGTGTAATGAAAATAACCAATTCTCGTCGCGTATGCTGCTGAGTATGGTTTCTGAACAGATGACCAAATACGGGAACCTCACCCAATATTGGCACCTGACTGCCACTATTCTTTTTTTGCTGCTGGAAAATGCCGCCTAATACAATAGTTTCTCCATCAGCGACCGTCACCTGAGTTTGGATTTCCTGTTTATCGATCGCTAACGCTTCGCCATTATCGCCTTGCTTAATCGTCTGTCCCGGCATGTTTTGACTGATTTTCAGGTTCAGCGTAATGCGTCCGGCACGCAGAATGTCGGGCGTCACTTCCATACCGAGCACCGCTTCTTTAAACTCGATGGAGGTCGATCCGCTAGCACCGCTGGAAACCTGATACGGAATTTCCGTTCCCTGCTTAATACTGGCGGTCTGCTGGTGTGCAGTAAACAGGCGGGGGCTGGCGATAATTTCAACCTGGCTTTCCTGCTCCAGCGCCATTAATTCCAGATCCAGCAAACGGCCATTCAGTCTCGCCAAATGGAACCCCGCATTGACTGCTGGCGTGTCTACCGGCAGGCCAACATTAAAATTATTCAGCCTGAGTGCCTTGTTCGCCGCGTTTCCTTCCCCCAGCCCCCAGTTAACCCCCAGCGCCTGTAGGTGTTCGCTGCTGATAGTGACAATATGCGCCGCCAGTTGCACCTGCGCTAACGGCAGATCGAGCTCCTTTAACCACGGTTCGAGCTGTGCCAACGCGTCTTCCGTATCGCGAATCAATAAGGTATTCGTCCGCTTATCCACAGTTACGCTGCCACGTGTAGAAAGCAGGGCTCCACGCTGGGCCTGAACGCTGGCCGCTACGTCAACCACATCAGCATACTGCAACGCGACAGAGAGGTTATGTAGCGGCAGTTTCTGCGCCAACTCCACCATGCGTTCATCCTTTTCCTTCTGTTGGGACGCAAGATGTTCAGCAGGGAAAACCAGCAGCACATTTCCGTTGCGCTCGACGCTCAGTTTCCCCATGCGTAAAACAATATCCAGCGCTTGCTGCCAGGGAACCTCTGCCAGTCTCAGGCTCAGATTTCCCGTCACACCCGGCGCGATGACCACATTGAGCTGTTGGTGATCGGCTAACGCCTGTAGCACCTGAGGTATTGGCGAATTCTCAAAAGCCATCGATACCGAAGGTTCAGCCCCGACCTGATACGGTACGGTGAGAAGCAGTAGCCAACTCAACGTCGCCACGCGACATAACATTCTTATATTCAT
Protein sequence:
MNIRMLCRVATLSWLLLLTVPYQVGAEPSVSMAFENSPIPQVLQALADHQQLNVVIAPGVTGNLSLRLAEVPWQQALDIVLRMGKLSVERNGNVLLVFPAEHLASQQKEKDERMVELAQKLPLHNLSVALQYADVVDVAASVQAQRGALLSTRGSVTVDKRTNTLLIRDTEDALAQLEPWLKELDLPLAQVQLAAHIVTISSEHLQALGVNWGLGEGNAANKALRLNNFNVGLPVDTPAVNAGFHLARLNGRLLDLELMALEQESQVEIIASPRLFTAHQQTASIKQGTEIPYQVSSGASGSTSIEFKEAVLGMEVTPDILRAGRITLNLKISQNMPGQTIKQGDNGEALAIDKQEIQTQVTVADGETIVLGGIFQQQKKNSGSQVPILGEVPVFGHLFRNHTQQHTRRELVIFITPTLIPASS
Protein structure:
AlphaFold
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
46093.9 424 5.73 0.014 32.57
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.