Effector profile
| PlantPEAD ID: PlantPEAD17276 | Uniprot ID: A0A6A3H1U4 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 129364 | Pathogen type: Oomycota |
| Species: Phytophthora rubi | Strain: SCRP249 | Other name: |
| Gene name: | NCBI Gene ID: QXFU01005913 | |
| Entry name: A0A6A3H1U4_9STRA | Protein name: glucan endo-1,3-beta-D-glucosidase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTAGATGTTGGCCGGGTCAATGACATTCCACTGCTGGTTCGGGTTGTTGGGCGAGCACCCATACAACTGCAGCTTGTTTCCCTGAGCAGGGTCCTGGTCGAGACAGAAGCCCTGGTGAACAGCGTGCTTGAGCTTGCCGGTGGAAGCTTCGAACGTCCACTTCTGGTTGTTCTCGTTGTCAATGCAGCGGAACACGTGCACGATGCCAGCGTCCCAGGCTTGGTACGCGTCCAGGCAGCGGTCGCTGCTCTTGGAGCGAACCTGCTGCGTGGCCGAGTCGAAGAACCACACCTGCTGCTCCTGCACCAGCCAGTCGTTCGACTTGCTCGACATGTAGAGACCGCCGTTGTTCTCCGACAGTAGCAGATTAGTACCAGCGTTGCGAATGGCACGAGGGTCCTTCCAGCCGATGGTGAGCCCCTGGAAGTTGCCCTTCATGGTGTCGTCCTCCTGGAAGATGCCGAAGTCGGCCTCCACCTCCTTGCCGCCGTTCGTCACGCGCCACTTGGAGTCAAACGCAACGTACCAGTAGTAGTCGAAGTTGTGCGAGCGGGCCATCTGAAAGAAGTCCGAGAAGAACTTGGCCTGGTTCTCAGGCGAGGCGACACCCGCAGCGGGGTCCGAGCCACCGGAGCTCCAGCCAGTCTCCGAGATCACGACGTTCTTGCCCCTGCTTGAAGCCAACACACGCAGGTTCTTGAGGCGGTCAAGCGTAATGGCCGCACCTTCGTTCACGTCCGCGTGCTCCCAGAAGGAGAACTGGTTCACGGACACGTAGTCCACGGCGTCAACGAGCTGCGGGTTAGTGTTGTAGATGTCAATAACGTCGGCGATGGACACCGGCGTATTCTTGCCACGGCTATGAATGTAGTCACGGATCTCCTTCATGTAGCTGATGGCGGTGTCGGCGTTGATCTCCTCGCGGTAGATGGTCTCGCTACCGACGTGCAGGCCAATGACGTTGTCATCGTAGAGACCCGAGTCGATGAGACCAGCAAGCTTGGCCTTCTCCTGCAGCAGGTAGTCGTGGCTGTTGGTCGTCCAGACACCGAGGTGCACCTTGA
Protein sequence:
KVHLGVWTTNSHDYLLQEKAKLAGLIDSGLYDDNVIGLHVGSETIYREEINADTAISYMKEIRDYIHSRGKNTPVSIADVIDIYNTNPQLVDAVDYVSVNQFSFWEHADVNEGAAITLDRLKNLRVLASSRGKNVVISETGWSSGGSDPAAGVASPENQAKFFSDFFQMARSHNFDYYWYVAFDSKWRVTNGGKEVEADFGIFQEDDTMKGNFQGLTIGWKDPRAIRNAGTNLLLSENNGGLYMSSKSNDWLVQEQQVWFFDSATQQVRSKSSDRCLDAYQAWDAGIVHVFRCIDNENNQKWTFEASTGKLKHAVHQGFCLDQDPAQGNKLQLYGCSPNNPNQQWNVIDPANI
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 39674.9 | 353 | 5.04 | -0.506 | 30.02 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR000490,IPR017853,IPR035992,IPR000772
Pfam: PF00332,PF00652
SMART: SM00458
KEGG:
PRINTS: