Effector profile
| PlantPEAD ID: PlantPEAD17406 | Uniprot ID: A0A1D9Q928 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 665079 | Pathogen type: Fungi |
| Species: Sclerotinia sclerotiorum | Strain: strain ATCC 18683 / 1980 / Ss-1 | Other name: Whetzelinia sclerotiorum |
| Gene name: | NCBI Gene ID: CP017821 | |
| Entry name: A0A1D9Q928_SCLS1 | Protein name: Probable glucan endo-1,3-beta-glucosidase eglC | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCTCTCAAAGACTCTCTTCGCCATTGTGGCTTCGCTTTCAACTGCATCTGCTGTTCACCAAGGTTTCAATTATGGTGCAACAAACGCAGATGGTTCTTACAGAGTTCAGTCGGATTTCCAAGCTGCTTTCGAGGCTGCCAACTCTTTGGTTGGTACCTCGGGTTTCACCAGTGCCAGATTATACACCATGCTCCAAGGTTCTACCACTGGTCCAACTTCAGCTATCCCAGCCGCTATTGCCTCAGATACAACTCTTCTCCTTGGTTTATGGGCATCGGGTGGAGCTGCCGGATTTGCCGCTGAGGTCAACGCTCTCAAGACAGCCATCACACAATACGGTTCCGCATTCACAAGCCGTGTCGTTGGTATCTCTGTAGGATCCGAGGATTTATACAGAAACTCCCCAACTGGTATCGCTGCCAAGGCTGGATATGGTGCCAACCCTGCCGACCTTGTCGACTACATCAAGCAAGTCAGAGATGCAATTTCTGGTACTGCTTTGAGCGGTGCTTCCATCGGACATGTTGATACTTGGACTGCTTGGGTCAACGGATCCAACAACGCTGTTGCCGAGGCTCTTGACTGGGTTGGAATGGATGCTTACCCATACTTCCAAGATAGCGAGGCAAATGGAGTCAGTGAAGGAAAGTCTCTCTTCAATGCCGCATTGGCCGCTACACAATCTGCTACCGGAAAGACCGTTTGGGTTACTGAGACTGGATGGCCGGTCACTGGTGCTACTGCTGGTGATGGTATTCCAAGTGCTGCTAACGCCAAGACATACTGGGATGATGTTGGATGCCCTAACTTTGGAAAGATCAACATGTACTGGTACACTCTTCAAGATCAAAATGCTGCTGGCTCCGTCACTCCCTCTTTCGGTATCGTTGGTAGCACTTTGAGCACCACTCCATTGTTCGATCTCAGCTGTTCCAACACCACATCAAGCAGCTCATCTACTGCATCTGCATCTTCCAAGCCTACCAGCGCTCTTGCATCATCTCTCGCATCTGCCGCCACTGGAGGATCCGTCGCTTCCACCGGCAGTGGCCTCTCTCCTTCTGGTATGGGAGCCGGTATCTCTTCTTCTGCTGTCTCTGGTGCTGCTGCCCCAACTGGAACAGGTTCAGCCGGTTCTTCATCTGGTGGATCGAGTAATGGAACCTCCACCTCGGGATCGTCTGGATCCGGATCCAGCTCAGGATCATCGGGATCCTCTTCTTCTCCATCCTCATCCACCGGTGGTGCAGCATCCCTTACAGGATCTGTTGCTCTAGCTCTTGGAGCCGTCTTTGCCGTTGCAGCTGCTTTGTAA
Protein sequence:
MLSKTLFAIVASLSTASAVHQGFNYGATNADGSYRVQSDFQAAFEAANSLVGTSGFTSARLYTMLQGSTTGPTSAIPAAIASDTTLLLGLWASGGAAGFAAEVNALKTAITQYGSAFTSRVVGISVGSEDLYRNSPTGIAAKAGYGANPADLVDYIKQVRDAISGTALSGASIGHVDTWTAWVNGSNNAVAEALDWVGMDAYPYFQDSEANGVSEGKSLFNAALAATQSATGKTVWVTETGWPVTGATAGDGIPSAANAKTYWDDVGCPNFGKINMYWYTLQDQNAAGSVTPSFGIVGSTLSTTPLFDLSCSNTTSSSSSTASASSKPTSALASSLASAATGGSVASTGSGLSPSGMGAGISSSAVSGAAAPTGTGSAGSSSGGSSNGTSTSGSSGSGSSSGSSGSSSSPSSSTGGAASLTGSVALALGAVFAVAAAL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 42589.4 | 438 | 4.55 | 0.124 | 19.98 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR000490,IPR017853
Pfam: PF00332
SMART:
KEGG:
PRINTS: