Effector profile
PlantPEAD ID: PlantPEAD17628 Uniprot ID: A0A0P9KKM1 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. berberidis ICMP 4065 Other name:
Gene name: NCBI Gene ID: RBRC01000076
Entry name: A0A0P9KKM1_9PSED Protein name: NmrA-like domain-containing protein
DOI:
Gene/Protein information
Gene sequence:
TTAGACGCCGGCAGTGGCTTCGCGGACGAAGCCTTCATAAGAGCGCAGCGGGTGTCCGATGATGGCTTCCAACCGTTCCACGGTTCCTTCAGCCGCTTGCATACCGAACTTCTGGATGCCCGCCATCATCAAGCGCATGTCGTAAGCCAGCCAGCCAGGACCGTAAGAAGCCAATTGCCCTTCGAAGGCTGCTACATCATCGCCACCGTAGGCGATCTCGCGATCCAGAGCGGAACTCCAGGTTTGTGCCACGGATGCACCAGTCAGCGCTTGTGGACCCACCAACTCCAGCGTTACAAGATCAAGAGCAGAAGATGCCTCGTCGCGTCGCAACAGTTCTGCCACGGCAACATCGGCAATATCGCGCGCGTCAATCATTGAAACGCCCGCCGAGCCGATAGGCATTGGGTACACCGAGTAGTTCTGGATCGTCTGCTGGACCATGAGGTCGTTTTGCATAAAGTACGCGGGACGCAGAATAGTCGCGGGGATGTCGAGGCTTTCGATCATGCGCTCGACCGTGTACTTGCCGGTGAAGTGCGGAACGTTGGTGAACGTGTCGGCATGAATCACGGACAGGTAAACGATGCGCTCGATACCAGCCTCCTGAGCGAGGTTCAGCGCGATCAGCGCTTGCGTAACTTCATCGGGCGTCACTGCATTGAGCAGAAACAGCGTGCGCACCGAAGACAGCGCGACACGCATGGAGGACACATCAGTGAGGTCTGCGACTACCTCGGTGACGCCAGCCGGAAAATCACGCTTGCCGGGTTGGCGCACCATGGCTTTGACATCGGCACCCGCGCTGGCGAGGCCCTGCGTAACGAGTGAACCGATGGTGCCCGTGGCGCCAGTAACGAGAATGCTCAT
Protein sequence:
MSILVTGATGTIGSLVTQGLASAGADVKAMVRQPGKRDFPAGVTEVVADLTDVSSMRVALSSVRTLFLLNAVTPDEVTQALIALNLAQEAGIERIVYLSVIHADTFTNVPHFTGKYTVERMIESLDIPATILRPAYFMQNDLMVQQTIQNYSVYPMPIGSAGVSMIDARDIADVAVAELLRRDEASSALDLVTLELVGPQALTGASVAQTWSSALDREIAYGGDDVAAFEGQLASYGPGWLAYDMRLMMAGIQKFGMQAAEGTVERLEAIIGHPLRSYEGFVREATAGV
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
30819.2 289 4.56 0.253 25.88
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.