Effector profile
PlantPEAD ID: PlantPEAD17696 Uniprot ID: A0A086GR18 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 1930 Pathogen type: Bacteria
Species: Streptomyces scabiei Strain: NCPPB 4086 Other name:
Gene name: NCBI Gene ID: JPPX01000177
Entry name: A0A086GR18_STRSC Protein name: Capsule biosynthesis protein CapD
DOI:
Gene/Protein information
Gene sequence:
TCAGCGGAAGATGTCGGCATTCTCCGCAGCCCACTGCTGGAACGGTCTGGCCGGGGAGCCGGTGACCCGTGAAACCGTGTCCCGCACCGCCAGCAGCTCGTCATTGACGTCTCCGCCCGTGACGTCAAGCACCGCCTCCGCGGCCTCGTCCCCGAAGACCGCGGCCATCTGAGCGTGAGCCTCCTGTCGACTGATCTCGCTGAAGGGCACCTCCCGCCCGAGCGCTGCCGAGATGGCCTCGACCTGCTGCCGGGGGGTCACCGACTGCGGACCGGTCAGGGCATACGTCCGCCCGTGGTGGCCGGGCTCGGTCAACGCCACCCGCGCCACCGACGCGATGTCCGCGGGGTGGATCGTGGGCAGCCCGGTGTCCGCATACGGCGCACGGACCGTCTCACGGGCACGGACCGACGCCGCCCACATCAGAGCGTTCGAGGCAAACTGCGTCGGCCGCAGGATCGTCCAAGCAATGCCGCTGTCCTGGAGCAGCCGCTCGACCGCCAGGTTCTCGCCGGCCGGGCCCAGGTGAGGATGGGTCTGGACCGTGATGGACGACACCAGCACCACGTGCTCCACACCCGCCAGTCGGGCGGCCTCAAGGATGTCGGCATCCGAACCCAGACGCGACACGAGGAACAGCGAGCGCACCCCGTCCAGAGCGGGCTCGAACGACTCCGGCTCCGCGAAATCACCCTCAACGGTCCCGACACCTTCGGGGAACGCGGCCCGTGCGGCGTCACGGGTGAATCCCCTCAGCGGCCCCACGCTGCATCCGTGCAACTCCCTCAGCAGAGCACTTCCTATGTTTCCGGTGGCTCCGGTCACGAGGATCAT
Protein sequence:
MILVTGATGNIGSALLRELHGCSVGPLRGFTRDAARAAFPEGVGTVEGDFAEPESFEPALDGVRSLFLVSRLGSDADILEAARLAGVEHVVLVSSITVQTHPHLGPAGENLAVERLLQDSGIAWTILRPTQFASNALMWAASVRARETVRAPYADTGLPTIHPADIASVARVALTEPGHHGRTYALTGPQSVTPRQQVEAISAALGREVPFSEISRQEAHAQMAAVFGDEAAEAVLDVTGGDVNDELLAVRDTVSRVTGSPARPFQQWAAENADIFR
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
29240.8 277 5.01 0.023 35.2
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.