Effector profile
PlantPEAD ID: PlantPEAD17790 Uniprot ID: A0A1B3E9F6 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 286 Pathogen type: Bacteria
Species: Pseudomonas Strain: sp. TCU-HL1 Other name:
Gene name: NCBI Gene ID: CP015992
Entry name: A0A1B3E9F6_9PSED Protein name: Lytic transglycosylase
DOI:
Gene/Protein information
Gene sequence:
ATGTTGTCTTCGCCGATCAGAACCTTCGACCTGGATGCATTGGCACGAGCCGCACGCGCGCTTGTGGTGGTGTTCGCCGCCACACTCGCCGGCTGCTCTGGCATGAGCCAGAAGGACGATGACCAGGGCCGGGACACCGACCGCGCGCTGGGCATGAACCAGCCGACCCAGTGGCTGGAAGAAACCGAGACCGAGCGTGAGCCCCAGGACATATGGGAACGCATGCGCAACGGTTTCAAGCTGCAGGGCGAGATCGGCGTCAACCCGCGCATCGAGCGCCAGCGCCTCTGGTACTCGAGCAAGCCTTCGTTTCTGGAAAGCGCCAGCTCCCGCGGCAGCCTCTATATCCACTACGTGGTCGAACGCCTGGAAGAGCGCAACATGCCGCTGGAACTGGCCCTGCTGCCGGTGGTGGAAAGCGCCTACAACCCCTTCGCCTATTCCCGTAGCCATGCGGTGGGCCTCTGGCAGTTCATCCCTTCAACCGGCCGCCATTACAACCTGCGCCAGACCAACTGGTACGACGGCCGTCGCGATATCACCGCGTCCACCAACGCCGCCCTGAACTACCTGGACCGTCTGCACGAGATGTTCAACGGCGACTGGTTGCTGGCCCTGGCCGCTTACAACGCCGGCGAGGGCACCGTGAGCCGCGCTATCGAACGCAACCAGAAGCTGGGCCTGCCGACCGACTACTGGAACCTGCCGCTGCCGCAGGAAACCCAGGACTACGTCCCCAAGTTGCTGGCCCTGTCGCAACTGGTGATGGCGCCCGAAGCCTACGGCGTGAACCTCAGCCCCATCGCCAATGAACCCTACTTCGAAGTGGTGGAGGTCAAGCAGCAGCGCCTCGACCTGTCCCAGGTGGCCGAACTGGCTGACATGGACGCCGACGAGATGTACCAGCTCAATCCGGCGTTCAAGAAGCGCATCACCCTGGATGGCCCGCAGCACCTGCTGGTGCCGACCGACAAGGCCGAGCTGCTGACCGCCAACCTCGCCCTGATGAAACCCCAGGAGCTGGTGGACTGGCAGCAGTACCGGGTGCGTAACGGCGACAGCCTCCACGGCATCGCCAACCGCTACCACGTGACGATCAAGACGCTGAAGGAGATCAACGGCCTGTCCGGCAACGATCTGCGCGTAGGCCAGCAGCTGAGTATTCCGGTGGAGCCGGGGCTGAAACCCGAGCAACCGCTGTTCCAGAATGTGGCCCGCAACAGCGCACCGGCTCCGACGCGCAGCCACAAGGTGAAAAGCGGCGAGAACCTCTGGACCATCGCCCGCCAGTACAAGGCGGACGTTCAGGACATCAAACGCTGGAACAACCTCAAGGGCAACCACCTCAAGACCGGACAAGTGCTGAAACTGCAAGGCGTCGCCACCCGGGTCGCCAGCCTCGGCAAAGACAAGGCCACGGGCGACAGCCGCGAGTCCGTGACCTACTACAAGGTCAAGCAGGGCGACTCCCTTTATCTGATCGCCAAGCGCTTCAATGTCGAGATGAAGCACCTGCAACGCTGGAACCCGCGCAGTGGCGGCGGTCTTAAACCCGGCCAGACCCTGACCGTCTATCTGCCCTGA
Protein sequence:
MLSSPIRTFDLDALARAARALVVVFAATLAGCSGMSQKDDDQGRDTDRALGMNQPTQWLEETETEREPQDIWERMRNGFKLQGEIGVNPRIERQRLWYSSKPSFLESASSRGSLYIHYVVERLEERNMPLELALLPVVESAYNPFAYSRSHAVGLWQFIPSTGRHYNLRQTNWYDGRRDITASTNAALNYLDRLHEMFNGDWLLALAAYNAGEGTVSRAIERNQKLGLPTDYWNLPLPQETQDYVPKLLALSQLVMAPEAYGVNLSPIANEPYFEVVEVKQQRLDLSQVAELADMDADEMYQLNPAFKKRITLDGPQHLLVPTDKAELLTANLALMKPQELVDWQQYRVRNGDSLHGIANRYHVTIKTLKEINGLSGNDLRVGQQLSIPVEPGLKPEQPLFQNVARNSAPAPTRSHKVKSGENLWTIARQYKADVQDIKRWNNLKGNHLKTGQVLKLQGVATRVASLGKDKATGDSRESVTYYKVKQGDSLYLIAKRFNVEMKHLQRWNPRSGGGLKPGQTLTVYLP
Protein structure:
NONE
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
59610.7 527 8.77 -0.527 44.82
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.