Effector profile
| PlantPEAD ID: PlantPEAD17808 | Uniprot ID: A0A1G7SV79 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 89065 | Pathogen type: Bacteria |
| Species: Pseudomonas abietaniphila | Strain: ATCC 700689 | Other name: |
| Gene name: | NCBI Gene ID: FNCO01000001 | |
| Entry name: A0A1G7SV79_9PSED | Protein name: Membrane-bound lytic murein transglycosylase D | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCGGCCTGCCTTGACCTTTCCGACCGGGTTGTCACGACTCGGCTGTCAGATACGCATCGGGTCGCTCGGCGTCTTCATGCTTTGCGCAGGTTGCCAGTCCTTCGACTACTCGCCCGAGGCCGCCGCTGAGCGTACGCCTCGGCTGGTGGCGGGGCTTCATCGCGATGTAAATCCTCAGACACCGGGCGCTGTGCCGGCGCGCTATGACGGCAGCGATGTATGGGGACGGTTGGGGCAAGGTTTCAGCCTGGTCGATGACAACGGCCTTAACCCGCGAATCGTCCGTCAGCGTGACTGGTTGCTGGAAAACCCGGCCTTTCTGCGCAATGCCAGCCAGCGGGCCAGTCCTTATCTTCATTTCATTGCGCAGTCTCTGGACGAGCGAAACATGCCGTCAGAGTTGGCGTTGTTGCCCATTGTCGAAAGCGCCTACAACCCCAAAGCCAACTCTGCTCGCGACGCCGCCGGACTGTGGCAATTCATGGCCGCCACCGGGCGTGACTTCAATCTGCGCCAGACAGCGTTTTACGACGGCCGGCGCGATGTCGTGGCCTCGAGCAAAGCAGCCATGGATTATCTGACCCGTCTGCACGACCAATTCAATGGCGACTGGCTCTTGGCAATGGCTGCCTATAACGCGGGCGAGGGCACCGTAATGCGGGCAATCGAGGCGAATCAGCGTCGGGGCCTGCCTACAGACTATTGGCATCTGAATCTGCCGCGAGAGACCCAGGATTACGTTCCGCGCCTGCTGGCGTTGTCGATGCTGGTGCGCGAACCGGCTGCCTACGGCGTGCAATTGAGCCCAGTGGCCAACGCACCGTATTTCACGGCTATCGAGCTCACGCACCCTGTCGACCTTTCCCGGTTGGCGGCCGCCGCTGGGGTCGATGAAGCCGTGCTTCTAGGCTTGAATCCTGCGTTTGTACGCAAGAAAACCATCGATGGACCGCGTCACCTGCTGGTTCCTCGAGATCAAGCGCGGCAGTTGGCGGCTGGCCTCGCAAATATGGAGGAGGGCGCCGCCGACGTTTCTGCCGAAACGCTGGCGATCAGCGCGACACCTTCATCGCCGTCTGTCAGGTGGGTGCCGTGA
Protein sequence:
MRPALTFPTGLSRLGCQIRIGSLGVFMLCAGCQSFDYSPEAAAERTPRLVAGLHRDVNPQTPGAVPARYDGSDVWGRLGQGFSLVDDNGLNPRIVRQRDWLLENPAFLRNASQRASPYLHFIAQSLDERNMPSELALLPIVESAYNPKANSARDAAGLWQFMAATGRDFNLRQTAFYDGRRDVVASSKAAMDYLTRLHDQFNGDWLLAMAAYNAGEGTVMRAIEANQRRGLPTDYWHLNLPRETQDYVPRLLALSMLVREPAAYGVQLSPVANAPYFTAIELTHPVDLSRLAAAAGVDEAVLLGLNPAFVRKKTIDGPRHLLVPRDQARQLAAGLANMEEGAADVSAETLAISATPSSPSVRWVP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 39909.3 | 365 | 6.61 | -0.18 | 42.62 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR023346,IPR000189,IPR008258
Pfam: PF01464
SMART:
KEGG:
PRINTS: