Effector profile
PlantPEAD ID: PlantPEAD17823 Uniprot ID: A0A1H1YM39 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 286 Pathogen type: Bacteria
Species: Pseudomonas Strain: sp. Z003-0.4C(8344-21) Other name:
Gene name: NCBI Gene ID: LT629756
Entry name: A0A1H1YM39_9PSED Protein name: Membrane-bound lytic murein transglycosylase D
DOI:
Gene/Protein information
Gene sequence:
ATGTCGTCATCCATACGTAAGTCCGTCAATTCAGACGCATTGACCCGCCTGGCGCAAGCCATCGCGGTGGCTGTGTCCGCCACGCTGGCGGGCTGTTCCAGCCATGCTCCGCAGACTGAAGCGACCCATACGCCGAACATTGCTGCGCGAGCCAAGCAGAAGCCGATCTGGCTGACCGAAAAGCCCAGCCCGCAGGTGCCTCAGGACATCTGGGAGCGCATGCGCGCAGGCTTTCAGTTGCAGGAAGGCCTGGGCGTCAACCCGCGCATCGAGCAACAGCGCCTGTGGTTCGCCAGCAATCCCTCTTTCCTCGAGAACGCCGGCGAACGCGGCAGTCTCTATATTCACTACATTGTCGAACGCCTCGAAGAGCGCAACATGCCGCTGGAACTGGCCCTGCTGCCAGTAATCGAGAGTGCGTACAACCCGATGGCCTACTCCCGCGCCGATGCGGTAGGCCTGTGGCAGTTTATTCCATCGACCGGGCGTTACTTCAACCTGCGTCAGACCCGCTTCTATGATGGTCGCCGCGATATCACCGCCTCGACCACCGCAGCGATGGATTACCTGACTCGTCTGCACGACATGTTCAACGGCGACTGGCTGTTGGCGCTGGCGGCGTACAACGCCGGTGAAGGCACGGTCAGCCGCGCCATCGAGCGCAACGAAAAGCTCGGCCTGCCGACCGACTACTGGAACCTGCCGCTGCCGGCGGAAACTCAGGCGTATGTGCCAAAACTGCTGGCGCTGTCGCAAGTGGTACTGGCGCCGGAAGCCTACGGCGTCAACCTCAATCCGATCGCCAACGAACCGTATTTCCAGGTTGTCGAAATCAACCAGCGCATGGACCTGTCCAAGGTCGCCGCGGTGGCCAACATCGACGAAGACGAGCTGTTCCAGCTCAACCCGGCCTTCAAGCAGCGCACCACGATCGACGGTCCACAGCATCTGCTGGTGCCGACGTCGAAGGCGCAATTGCTCACGGCCAGTCTGCAGACCATGCGCCCCGACGAGCTGATCAGCCCGCGCTCGCTTAAACCGGTGTTCGAAGGCGCCGACCCGTCCGAAGTTGCGCAGCTCAAGCGCGCTTACCGGGTCAAGCGTGGGGACAATCTCGGTTCCATTGCCAAGGCCAACAAGGTCGAAGTGAAGGATCTGCAGCGCTGGAACAAGCTGACCGGCAAGAATCTCAAGATTGGTCAGACTCTGGTGATGCAGGACACCAGCAAACGCGCACCGGCTCGCAAGTCTGGCCGGGTCAACACGGTGGTCGCGGCCAACAGCAAGACCAAAGGCAAGGACGACAGCCAGCAACAGACCCAGTACAAGGTCAAGCGTGGCGACACCTTGTATGTGGTGGCCAAGCGCTTCAACGTGCAGATGCAGCATCTCAAGCGCTGGAATCCAGGGGCCGGCAAGGCCTTGAAGCCTGGGCAGATGCTCACGGTTTATCAGCCGCATTGA
Protein sequence:
MSSSIRKSVNSDALTRLAQAIAVAVSATLAGCSSHAPQTEATHTPNIAARAKQKPIWLTEKPSPQVPQDIWERMRAGFQLQEGLGVNPRIEQQRLWFASNPSFLENAGERGSLYIHYIVERLEERNMPLELALLPVIESAYNPMAYSRADAVGLWQFIPSTGRYFNLRQTRFYDGRRDITASTTAAMDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNEKLGLPTDYWNLPLPAETQAYVPKLLALSQVVLAPEAYGVNLNPIANEPYFQVVEINQRMDLSKVAAVANIDEDELFQLNPAFKQRTTIDGPQHLLVPTSKAQLLTASLQTMRPDELISPRSLKPVFEGADPSEVAQLKRAYRVKRGDNLGSIAKANKVEVKDLQRWNKLTGKNLKIGQTLVMQDTSKRAPARKSGRVNTVVAANSKTKGKDDSQQQTQYKVKRGDTLYVVAKRFNVQMQHLKRWNPGAGKALKPGQMLTVYQPH
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
54403.2 487 9.66 -0.445 44.73
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.