Effector profile
PlantPEAD ID: PlantPEAD17824 Uniprot ID: A0A1H5BRT4 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 104087 Pathogen type: Bacteria
Species: Pseudomonas frederiksbergensis Strain: BS3655 Other name:
Gene name: NCBI Gene ID: FNTF01000002
Entry name: A0A1H5BRT4_9PSED Protein name: Membrane-bound lytic murein transglycosylase D
DOI:
Gene/Protein information
Gene sequence:
TTAATGCGGGGAAGCCACCGTCAGCATCTGGCCGGGCTTCAGCGCCTGGCCAACACGTGGGTTCCAGCGCTTGAGGTGCTGCATTTCAACGTTGAAGCGTTTGGCGACCATGTACAGCGAGTCGCCTTGCTTGACCTTGTATTGGGTCTGCGACTTCTGCTTGTCAGCTTTAGTGTTTGCTTTGCTGTTCGCCGCCACGACGGTGTTGACCCGACCGCGGCTGCGCTTGGTGGTGTCCTGCATGACCAATGTCTGGCCGGCCTTGAGGTTCTTGCCGGTCATCTTGTTCCAGCGCTGCAGATCCTTGACGTCGACGTTGTTGGCCTTGGCGATAGCGGCCAGGTTGTCGCCGCGTTTGACGCGGTAGGCACGTTTGAGGCCGGCGATTTCAGAGTCGTCTGCACCTTCGAATACCGGTTTGAGCGACTTCTTGCTGATCAGCTCTTCAGGACGCATGGTCGACAGGCTGGCGGTCAGCAGTTGCGCCTTGGACGTCGGCACCAGCAAATGCTGGGGGCCATCGATGGTAGTGCGCTGCTTGAAGGCGGGGTTGAGCTGGAACAGTTCGTCTTCGTCGATGTTCGCCACCGCGGCGACCTTGGACAGGTCCATGCGCTGGTTGATTTCGACGACCTGGAAGTACGGTTCGTTGGCGATCGGGTTCAGGTTCACGCCGTAGGCTTCAGGTGCCAGCACCACTTGCGACAGGGCCAGCAGCTTTGGCACGTAGGCCTGGGTTTCGGCCGGCAGCGGCAGGTTCCAGTAATCGGTCGGCAAACCGAGCTTTTCGTTGCGCTCGATGGCCCGGCTGACGGTGCCTTCGCCGGCGTTGTACGCGGCCAGGGCCAGCAGCCAGTCGCCGTTGAACATGTCGTGCAGGCGGGTCAGGTAATCCATCGCTGCGGTGGTCGAGGCGGTGATATCGCGACGGCCATCATAGAAGCGGGTTTGACGCAGGTTGAAGTAACGCCCGGTGGAAGGGATGAATTGCCACAAGCCAACCGCGTTGGCCCGGGAATAGGCCATCGGGTTGTAGGCGCTTTCAATCACTGGCAGTAGCGCCAGTTCCAGCGGCATGTTGCGTTCTTCAAGGCGTTCGACGATGTAGTGAATGTAGAGGCTGCCGCGTTCGCCGGCGTTCTCGAGGAAGGACGGGTTGCTGGCGAACCACAGGCGCTGTTGCTCGATGCGCGGGTTGACACCCACGTTGTCCTGCAACTGAAAGCCTTGGCGCATGCGCTCCCAGACATCTTGCGGAATTTGTGGAGTCGGTTTTTCGCTGAGCCAGATAGGTTTCTGCTTGGCCCGGGCGGCGATATTCGGAGTGTGTGTCGCTTCGGTCTGCGGCACATGGCTGGAACAGCCCGCCAGCGTGGCGGACACAGCCACCGCAATGGCTTGAGCCAAGCGGGTCAATGCGTCTGAATTGATGGCTTTACGAATAGATGACGACAT
Protein sequence:
MSSSIRKAINSDALTRLAQAIAVAVSATLAGCSSHVPQTEATHTPNIAARAKQKPIWLSEKPTPQIPQDVWERMRQGFQLQDNVGVNPRIEQQRLWFASNPSFLENAGERGSLYIHYIVERLEERNMPLELALLPVIESAYNPMAYSRANAVGLWQFIPSTGRYFNLRQTRFYDGRRDITASTTAAMDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNEKLGLPTDYWNLPLPAETQAYVPKLLALSQVVLAPEAYGVNLNPIANEPYFQVVEINQRMDLSKVAAVANIDEDELFQLNPAFKQRTTIDGPQHLLVPTSKAQLLTASLSTMRPEELISKKSLKPVFEGADDSEIAGLKRAYRVKRGDNLAAIAKANNVDVKDLQRWNKMTGKNLKAGQTLVMQDTTKRSRGRVNTVVAANSKANTKADKQKSQTQYKVKQGDSLYMVAKRFNVEMQHLKRWNPRVGQALKPGQMLTVASPH
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
54112.8 484 9.63 -0.429 45.08
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.