Effector profile
PlantPEAD ID: PlantPEAD17831 Uniprot ID: A0A1H6V5F3 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 286 Pathogen type: Bacteria
Species: Pseudomonas Strain: sp. NFR16 Other name:
Gene name: NCBI Gene ID: FNYJ01000002
Entry name: A0A1H6V5F3_9PSED Protein name: Membrane-bound lytic murein transglycosylase D
DOI:
Gene/Protein information
Gene sequence:
ATGTCGTCATCTATACGCAGAACCTTTAATTCCGACGCATTGACTCGGTTAGCGCAGGCGATCGCGGTGATCGCGAGCGCCACTCTGGCGGGCTGCCAGACCACCAGCAGCCTGGAGCCTGCCGGCTCCACGAATGCTTCCCACTCCTCTGCCGTAACGAAACCAAAACCGGTTTTCGTGGCGCGCAAGCCTGCACCACTCGCCCCGCCGCACGACGTCTGGGAACGCATGCGGCAGGGCTTCCAATTGCAGGACGGCAACGACCTCAACCCGCGTATCGACCAGCAGCGTCTTTGGTTTGCCAACAACCCGTCGTTTCTCGAAACAGCCGGTGAGCGTGGCAGCCTGTACATGCACTACATCGTCGAGCGCCTGGAAGAACGCAACATGCCGCTGGAGCTGGCACTGCTGCCGGTGATCGAGAGCGCCTACAACCCGATGGCCCTGTCGCGCAGCGATGCCGCCGGGATCTGGCAGTTCATCCCGTCCACCGGCCGCTATTTCAACCTGCGCCAGACCAACTTCTACGATGGCCGTCGTGATATCACGGCATCCACCACTGCGGCGCTGGACTACCTGACCAAGCTGCATGACATGTTCAACGGCGACTGGCTGCTGGCCCTTGCGGCCTACAACGCCGGTGAAGGCACGGTCAGCCGCGCCATCGAGCGCAATGAACGGCTCAACCTGCCCACCGATTACTGGAACCTGCCGCTGCCGCAGGAAACCCGTGACTACGTGCCTAAACTGCTGGCGCTGTCGCAGGTGGTGATGTCGCCGCAGGCCTACGGGGTCAACCTGAACCCCATCGACAACAAGCCTTACTTCGAAGTCGTCGAGCTGAACCAGCGCATGGACCTGACCAAGGTCGCGCAAATGGCCGACATCGACGAAGACGAGCTGATGCAGCTCAATCCGGCCTTCAAGAAACGCCTGACCATCGACGGCCCGCAGCATTTGCTGGTGCCGACGTCAAAATCGCAACTGTTGACCGCCAGCCTGTCGAACATGAAACCCGAAGAGCTGGTGGACTGGCAGCAATACCGCGTACGTCCGGGCGACAGCCTGGCGAGCATCGCCAGTCGCTATAAAGTCTCGACCGGCACGTTGAAGGACCTGAACAAGCTGTCCAGCAACCACCTCAAGCGTGGCATGGCGTTGACCATTCCGGTCCAGCCGGGCATGAAAACCACGCTGCCCGTGTTCGAAGAAGTCGCCGAAGTCGACGAAAAGCCTGCGCGCACCCGCACCTATAAAGTGAAAAAGGGCGACAACCTCGGGCAGATCGCCCGGATCAACAAGGTTGAAGTCAAGGATCTGCAGCACTGGAACAAGCTGTCCGGCTACAACCTGAAAGTCGGCCAGACGCTGGTGATGCAGGACAACAGCAAGCCGGCCAAGGCCAGCACCCGCGCGGTCGCCAAAGCCGACACCGGCACTGCCAAGGGCGAGGACGCCGACAAGAAATCCATGCAGTACAAGATCCAGAAAGGGGATTCGCTGTATCTGGTGGCCAAGCGTTTCAACGTCGAAATGCAGCACCTCAAGCGCTGGAACCCACGCAGCGGACAGGCGCTGAAGCCGGGCCAGACGCTGACGGTGTATCTGCCGCATTGA
Protein sequence:
MSSSIRRTFNSDALTRLAQAIAVIASATLAGCQTTSSLEPAGSTNASHSSAVTKPKPVFVARKPAPLAPPHDVWERMRQGFQLQDGNDLNPRIDQQRLWFANNPSFLETAGERGSLYMHYIVERLEERNMPLELALLPVIESAYNPMALSRSDAAGIWQFIPSTGRYFNLRQTNFYDGRRDITASTTAALDYLTKLHDMFNGDWLLALAAYNAGEGTVSRAIERNERLNLPTDYWNLPLPQETRDYVPKLLALSQVVMSPQAYGVNLNPIDNKPYFEVVELNQRMDLTKVAQMADIDEDELMQLNPAFKKRLTIDGPQHLLVPTSKSQLLTASLSNMKPEELVDWQQYRVRPGDSLASIASRYKVSTGTLKDLNKLSSNHLKRGMALTIPVQPGMKTTLPVFEEVAEVDEKPARTRTYKVKKGDNLGQIARINKVEVKDLQHWNKLSGYNLKVGQTLVMQDNSKPAKASTRAVAKADTGTAKGEDADKKSMQYKIQKGDSLYLVAKRFNVEMQHLKRWNPRSGQALKPGQTLTVYLPH
Protein structure:
NONE
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
60269.8 538 9.38 -0.489 38.89
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.