Effector profile
PlantPEAD ID: PlantPEAD17838 Uniprot ID: A0A1I3ND10 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 289370 Pathogen type: Bacteria
Species: Pseudomonas argentinensis Strain: LMG 22563 Other name:
Gene name: NCBI Gene ID: VZPI01000001
Entry name: A0A1I3ND10_9PSED Protein name: LysM peptidoglycan-binding domain-containing protein
DOI:
Gene/Protein information
Gene sequence:
ATGCCTTCCTCTCGACCTAAACCCTTGAATTCAAAGGCATTGACCCTGCGTTACCCCGCGCTGGCACTGGCTGTGTGTGTGGTGCTCAGCGGCTGCCAGAGCCTCGAGCCACAGCAGGCCGATGCCGGCCCGGTGGTGGACCTGAGCGGCAGAACGCCGCACCAGCCGTTGTGGATCAATGCCAAGGTCGGTGCCGAGCAGCCTAAGGATATCTGGGAGCGCGTGCGCTCGGGCTACCAGTTGCAGGACGCCATCGGCGTCAACCCGCGCATCGAGCAGCAACGCCTGTGGTTTGCCAGCAACCCGTCGTTCGTCGAGAAATCCGGAGAGCGCAGCAGCCCCTACATCCATTACATCGTCGAACGCCTGGAAGAGCGCAACATGCCAATGGAGCTGGCGCTGCTACCGATGATCGAAAGCGCCTACAATCCATTTGCCTATTCGCCGGCCGATGCCGTCGGCCTGTGGCAGTTCATCCCGTCTACCGGGCGCAACTTCAATTTGCGACAGACCCGCTGGTACGACGGCCGCCGCGATGTCACGGCCTCCACCCAGGCCGCCATGGACTATCTGGCGCGCCTGCACGAAATGTTCAACGGCGACTGGCTGCTTGCCCTGGCCGCCTATAACGCCGGTGAAGGACGGGTCAGCCGCGCCATCGAGCGCAACCAGAAGCTTGGCCTGCCAACCGATTACTGGAACCTGTCGCTGCCCCAGGAAACCCAGAACTACGTGCCCAAGCTGCTCGCCCTGTCCCAGGTGATCATGGCACCGAGCGGCTACGGCGTGAGCCTGGCCCCGATTGCCAACGAGCCCTACTTCGAAGAGGTGGAGCTCAAGCAACGCATGGACCTGGCGCGTGTTGCAGCCCTGGCCGAGGTGGACGAAGACGAGCTGTACCTGCTCAACCCCGCCTTCAAGAAGCGCATCACCGTGGATGGCCCGCAGCACCTGCTGGTGCCAACCCGGAAGGTCGAGCTGCTGACGGCCAACCTGTCGACGCTCAAACCCGAGGATCGCGGCCTGCAGGAATACGTGGTGCGTGCCGGCGACAACCTGCACGGCATCGCCAGTCGCTACCAATTGAGCGTTGCCAGCATCAAGGAGCTCAACCAGCTCCGTGGCAATACCCTGAGCGTGGGCCAGCACCTGAACCTGCCGACCGACCTGCAGCCGGTGCCGGATGCAGCGCCGCAGCGAACGGTCAATACCGCCGTCGCCTCGCGCAGCTACACCATCCGCAATGGCGACAACCTCTGGCAGATCGCCAAGGCCCATAACGTGGCCGTCAGCGACATCCAGCGATGGAACGCCCTCAAGGGCAATTCGCTGCGTGTCGGCCAGACCATCAAGCTGCAGGGTGGCAACTCCAGCACGAAAACCGTCGCCCAGCGTGACGGCGTCACCTATTACAAGGTGCGCAAGGGCGATTCGCTGCACCTGATCGCCAAGCGCTTCAACGTGCAGATGAAGAACCTGCAGAGCTGGAACCCACGCACCGGCAAGGCGTTGAAACCGGGCCAGGTACTGACCCTGCGCCTGCCTGACTGA
Protein sequence:
MPSSRPKPLNSKALTLRYPALALAVCVVLSGCQSLEPQQADAGPVVDLSGRTPHQPLWINAKVGAEQPKDIWERVRSGYQLQDAIGVNPRIEQQRLWFASNPSFVEKSGERSSPYIHYIVERLEERNMPMELALLPMIESAYNPFAYSPADAVGLWQFIPSTGRNFNLRQTRWYDGRRDVTASTQAAMDYLARLHEMFNGDWLLALAAYNAGEGRVSRAIERNQKLGLPTDYWNLSLPQETQNYVPKLLALSQVIMAPSGYGVSLAPIANEPYFEEVELKQRMDLARVAALAEVDEDELYLLNPAFKKRITVDGPQHLLVPTRKVELLTANLSTLKPEDRGLQEYVVRAGDNLHGIASRYQLSVASIKELNQLRGNTLSVGQHLNLPTDLQPVPDAAPQRTVNTAVASRSYTIRNGDNLWQIAKAHNVAVSDIQRWNALKGNSLRVGQTIKLQGGNSSTKTVAQRDGVTYYKVRKGDSLHLIAKRFNVQMKNLQSWNPRTGKALKPGQVLTLRLPD
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
57645.8 516 9.4 -0.395 44.91
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.