Effector profile
PlantPEAD ID: PlantPEAD17847 Uniprot ID: A0A1P8F2X1 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 104087 Pathogen type: Bacteria
Species: Pseudomonas frederiksbergensis Strain: AS1 Other name:
Gene name: NCBI Gene ID: CP018319
Entry name: A0A1P8F2X1_9PSED Protein name: Lytic transglycosylase
DOI:
Gene/Protein information
Gene sequence:
ATGTCGTCATCTATTCGTAAAGCCATCAATTCAGACGCATTGACCCGCTTGGCTCAAGCCATCGCGGTGGCTGTGTCCGCCACGCTGGCGGGCTGTTCCAGCCATGTGCCGCAGACCGAAGCGACACACACTCCGAATATCGCCGCCCGGGCCAAGCAGAAACCTATCTGGCTCAGCGAAAAACCGACTCCACAAATTCCGCAAGATGTCTGGGAGCGCATGCGCCAAGGCTTTCAGTTGCAAGACAACGCGGGTGTCAACCCGCGCATCGAGCAACAGCGCCTGTGGTTCGCCAGCAACCCGTCCTTTCTCGAGAACGCCGGCGAACGCGGCAGCCTCTACATTCACTACATCGTCGAACGCCTTGAAGAACGCAACATGCCGCTGGAACTGGCGCTACTGCCAGTGATTGAAAGCGCCTACAACCCGATGGCCTATTCCCGGGCCAACGCGGTTGGCTTGTGGCAATTCATCCCTTCCACCGGGCGTTACTTCAACCTGCGTCAAACCCGCTTCTATGATGGCCGTCGCGATATCACCGCCTCGACCACCGCGGCCATGGACTACCTCACCCGCCTGCACGACATGTTCAATGGCGACTGGCTGTTGGCCCTGGCCGCGTACAACGCCGGCGAAGGCACCGTCAGCCGGGCCATCGAGCGCAACGAAAAGCTCGGTTTGCCGACCGATTACTGGAACCTGCCGCTGCCGGCCGAAACCCAGGCCTACGTGCCAAAGCTGCTGGCCCTGTCGCAAGTGGTGCTGGCACCTGAAGCCTACGGCGTGAACCTGAACCCGATCGCCAACGAACCGTACTTCCAGGTCGTCGAAATCAACCAGCGCATGGACCTGTCCAAGGTCGCCGCGGTGGCGAACATCGACGAAGACGAACTGTTCCAGCTCAACCCCGCCTTCAAGCAGCGCACTACCATCGATGGCCCCCAGCATTTGCTGGTGCCGACGTCCAAGGCGCAACTGCTGACCGCCAGCCTGTCGACCATGCGTCCTGAAGAGCTGATCAGCAAGAAGTCGCTCAAACCGGTATTCGAAGGTGCAGACGAGTCTGAAATCGCCGGCCTCAAACGTTCCTACCGCGTCAAACGCGGCGACAACCTGGCTGCTATCGCCAAGGCCAACAAGGTCGACGTCAAGGATCTGCAGCGCTGGAACAAAATGACCGGCAAGAACCTCAAGGCCGGCCAGACATTGGTCATGCAGGACACCACCAAGCGCAGTCGTGGTCGGGTCAACACCGTCGTGGCGGCGAACAGCAAAGCAAACACTAAAGCTGACAAGCAGAAGTCGCAGACCCAATACAAGGTCAAGCAAGGCGACTCGCTGTACATGGTCGCCAAGCGCTTCAACGTTGAAATGCAGCACCTCAAGCGCTGGAACCCACGTGTTGGCCAGGCGCTGAAGCCCGGCCAGATGCTGACGGTGGCTTCCCCACGCTAA
Protein sequence:
MSSSIRKAINSDALTRLAQAIAVAVSATLAGCSSHVPQTEATHTPNIAARAKQKPIWLSEKPTPQIPQDVWERMRQGFQLQDNAGVNPRIEQQRLWFASNPSFLENAGERGSLYIHYIVERLEERNMPLELALLPVIESAYNPMAYSRANAVGLWQFIPSTGRYFNLRQTRFYDGRRDITASTTAAMDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNEKLGLPTDYWNLPLPAETQAYVPKLLALSQVVLAPEAYGVNLNPIANEPYFQVVEINQRMDLSKVAAVANIDEDELFQLNPAFKQRTTIDGPQHLLVPTSKAQLLTASLSTMRPEELISKKSLKPVFEGADESEIAGLKRSYRVKRGDNLAAIAKANKVDVKDLQRWNKMTGKNLKAGQTLVMQDTTKRSRGRVNTVVAANSKANTKADKQKSQTQYKVKQGDSLYMVAKRFNVEMQHLKRWNPRVGQALKPGQMLTVASPR
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
54147.9 484 9.7 -0.443 46.32
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.