Effector profile
PlantPEAD ID: PlantPEAD17851 Uniprot ID: A0A1S1GHL8 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 286 Pathogen type: Bacteria
Species: Pseudomonas Strain: sp. HMSC75E02 Other name:
Gene name: NCBI Gene ID: LTNB01000497
Entry name: A0A1S1GHL8_9PSED Protein name: Lytic transglycosylase
DOI:
Gene/Protein information
Gene sequence:
TCAACGACTCGCGGTATCGAGATAAAGCGTCAGCGTCTGCCCAGGCTTGAGCGCGTGGGCGCTGCTGCGCGGGTTCCAGCGCTTGATGTGCTGCATCTCGACGTTGAAGCGCTTGGCGATCAGGTACATGGAATCGCCCTGCTTGACCTTGTAGTAGGTCGCCGCTTCCTGCTGCTGCTTGGCCTTGCCGCTGGCGCCGCTGCGCGATGCCAGCTGGGTGGCGCCTTGCAGCTTGAGCACCTGGCCGGGCTTGACGCCGTGGCTGTCCAGGCCGTTCCAGCGCTTCAGGTCGTCGACGCCGACGCCGGTGGCGCGGGCGATCTGCCAGAGGTTGTCGCCGCTCTTGACCTTGTAGCTGCGGGTGGCGTTGGCCAGGCTGGGCGCCTTGGTCGCGCCGGCCTTGGCCACCTGGCGCGCGGGCTCCAGTTCCGGCATGCGGCTGCCCTTGGCCGGGATCAGCAGCGCCTGGCCGTTGCGCACGCGGTTGGAGCTCAGGCGGTTGCTGCTCTTGAGCTCGGCCACGCTGATGCCGTGCTTGGCCGCGATGCTGCGCAGGCTGTCGCCGCGGCGCACCTTGTACTGCTTCCAGCTCACCAGGTCCTGGGGCTGCAGGGAGGCGAGGCCGGCCTTGAGCCGTTCCACCTTCTCCTTGGGCACCAGCAGCTGCTGCGGGCCGTCCATGGTGATGCGGCGCTTGAAGGCCGGGTTGAGCAGGTACAGCTCGTCCTCGTCGAGTTCGGCCAGCGCCGCGACGCGCGACAGGTCCAGGCCGGGCTTGACCTTCACCGCGGCGAAGTAGGATTCGTTGGCGATGGGGTTGAGGTTGATGCCGTAGGCTTCCGGCGACATCACCAGCTGCGACAGGGCCAGCAGCTTGGGCACGTAGTCCTGGGTTTCCTGGGGCAGCGGCAGGTTCCAGTAGTCGGTCGGCAGGCCGAGTTTCTGGTTGCGCTCGATGGCGCGGCTGACGGTACCTTCGCCGGCGTTGTAGGCGGCCAGGGCGAGCAGCCAGTCGCCGTTGAACATGTCGTGCAGGCGGTTCAGGTAGGTCAGCGCCGCGTTGGTCGAGGCCTTGATGTCGCGGCGGCCGTCGTACCAGCTGGTCTGGCGCAGGTTGAAATGGGTGCCGGTGGTGGGGATGAACTGCCACAGGCCCACCGCCTGGGCGCGGGACACGGCCAGGGGGTTGTAGGCGCTCTCGATCATCGGCAGCAGCGCCAGTTCCAGCGGCATCTGCCGCTCTTCCAGGCGCTCCACCACGTAGTGCATGTAGGGGCTGCCGCGCTCGGAGGCCTGCTCGATGAAGGCCTGGTTGCTGACGAACCACAGGCGCTGGCGTTCGATGCGCGGGTTGGTGTCGGTGGCGTCGGCCTGCAGCTGGAAGCCGTGGCGCATGCGCTGCCAGATGTCGCTGTCGGCGTAGGCCGGGTTGAACTGTACGTCCACCGCGCGGCTGGCGGGGCGGTAGGTCAGGGTGTCCTGGTCGGTGCCGCTGTGCTGGCTGGTCTGGCAGCCGGCGAGGGCGCCGGCGCCGAGCAGGACGGAGACTCGTATGGCACGAGCCAATGCGTCTAGATCGCTGGTCTTACTGGTCTTTGGCGGCAT
Protein sequence:
MPPKTSKTSDLDALARAIRVSVLLGAGALAGCQTSQHSGTDQDTLTYRPASRAVDVQFNPAYADSDIWQRMRHGFQLQADATDTNPRIERQRLWFVSNQAFIEQASERGSPYMHYVVERLEERQMPLELALLPMIESAYNPLAVSRAQAVGLWQFIPTTGTHFNLRQTSWYDGRRDIKASTNAALTYLNRLHDMFNGDWLLALAAYNAGEGTVSRAIERNQKLGLPTDYWNLPLPQETQDYVPKLLALSQLVMSPEAYGINLNPIANESYFAAVKVKPGLDLSRVAALAELDEDELYLLNPAFKRRITMDGPQQLLVPKEKVERLKAGLASLQPQDLVSWKQYKVRRGDSLRSIAAKHGISVAELKSSNRLSSNRVRNGQALLIPAKGSRMPELEPARQVAKAGATKAPSLANATRSYKVKSGDNLWQIARATGVGVDDLKRWNGLDSHGVKPGQVLKLQGATQLASRSGASGKAKQQQEAATYYKVKQGDSMYLIAKRFNVEMQHIKRWNPRSSAHALKPGQTLTLYLDTASR
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
59290.5 534 9.72 -0.457 48.1
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.