Effector profile
PlantPEAD ID: PlantPEAD17856 Uniprot ID: A0A1V2K7Z8 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 651740 Pathogen type: Bacteria
Species: Pseudomonas cedrina Strain: subsp. cedrina strain DSM 17516 Other name:
Gene name: NCBI Gene ID: MNPW01000007
Entry name: A0A1V2K7Z8_PSECE Protein name: Lytic transglycosylase
DOI:
Gene/Protein information
Gene sequence:
ATGTCGTCATCTATTCGTAAATCCAACCATTCAGACGCATTGACCCGCCTGGCTCAAGCTGTGGCGGTGGCTGTTTCCGCCACGCTGGCGGGCTGCCAATCAAACAATTTCACCGCACAATCCACCGTGCAACCCAAGCCAAACCTCAGCGCCAAGATCAAACAGAAACCCGTCATCTGGCTTTCCGAAAAGCCGACCCCCGAAGCCCCCCAGGATGTCTGGGAGCGTATGCGACGGGGCTTTCAATTGCAGGACGGAGTGGGCGTAAACCCGCGTATCGAGCAACAGCGCCTGTGGTTCGCCAGCAACCCCTCCTTCCTTGAGAACGCCGGTGAACGCGGCAGCCTCTATATTCATTACATCGTCGAACGCCTTGAAGAGCGCAACATGCCCCTGGAGCTGGCGCTGCTGCCAGTGATTGAAAGTGCCTACAACCCGATGGCCTATTCGCGCAGCGATGCGGTCGGCCTGTGGCAGTTCATTCCCTCCACCGGGCGCTACTTCAACCTGCGCCAGACCCGCGCCTACGACGGCCGCCGCGACATTACCGCTTCCACCACCGCCGCCCTGGACTACCTGACGCGCCTGCACGACATGTTCAACGGCGACTGGTTGCTGGCCCTCGCCGCCTACAACGCCGGCGAAGGCACCGTGAGCCGGGCCATCGAGCGCAACGAGAAGCTCGGCCTGCCCACCGATTACTGGAACCTGCCACTGCCCCAGGAAACCAAGGACTACGTGCCCAAGTTCCTGGCGCTGTCACAGGTGGTGCTGGCGCCGGAAGCCTACGGCGTCAACCTGAACCCGATTGCCAACACGCCCTATTTCGAAGTGGTTGAAGTCAAGCAAAGCATGGACCTGTCACGGGTCGCCGCGCTGGCCGAGATCGACGAAGACGAGCTGTTCCAGCTCAACCCGGCCCTGAAACAACGTACCACCCTGGACGGCCCCCAGCATTTGCTGGTGCCAAGCTCCAAGGCGCAATTGCTCACCAGCACCCTTTCGACGATGAAACCGGAAGAATTGCTGGCGATGCGCCCCAAAAAGCAGGTGTTCGACGAAGTCGAGACCGCGCGGGTTGCCGGTCGCACCCGCAACTACAAGGTGCGCAACGGCGACAACCTCACGCTGATTGCCAAGGCCAACAAGGTCGACGTGCATGACCTGCAACGCTGGAACAAACTCAACGGCCAGGCGCTCAAGGTCGGCCAGACCCTGGTGATGCAGGACACCCGCAAGCTGGTAGCGAAGGCTGACAGCAAGAAGCCCGTGCAATACAAGGTCAAGAAAGGCGACTCGTTGTACATCGTCGCCAAGCGCTTCAACGTCGAGATGCAACATCTCAAGCGTTGGAACCCGCGCACCGGGCAGGCATTGAAGCCGGGGCAGATGCTGGTGGTTTCCGGGCCAAGATAA
Protein sequence:
MSSSIRKSNHSDALTRLAQAVAVAVSATLAGCQSNNFTAQSTVQPKPNLSAKIKQKPVIWLSEKPTPEAPQDVWERMRRGFQLQDGVGVNPRIEQQRLWFASNPSFLENAGERGSLYIHYIVERLEERNMPLELALLPVIESAYNPMAYSRSDAVGLWQFIPSTGRYFNLRQTRAYDGRRDITASTTAALDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNEKLGLPTDYWNLPLPQETKDYVPKFLALSQVVLAPEAYGVNLNPIANTPYFEVVEVKQSMDLSRVAALAEIDEDELFQLNPALKQRTTLDGPQHLLVPSSKAQLLTSTLSTMKPEELLAMRPKKQVFDEVETARVAGRTRNYKVRNGDNLTLIAKANKVDVHDLQRWNKLNGQALKVGQTLVMQDTRKLVAKADSKKPVQYKVKKGDSLYIVAKRFNVEMQHLKRWNPRTGQALKPGQMLVVSGPR
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
52953.7 471 9.57 -0.432 42.79
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.