Effector profile
PlantPEAD ID: PlantPEAD17863 Uniprot ID: A0A1Y3P249 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 1451454 Pathogen type: Bacteria
Species: Pseudomonas caspiana Strain: FBF102 Other name:
Gene name: NCBI Gene ID: LOHF01000040
Entry name: A0A1Y3P249_9PSED Protein name: Lytic transglycosylase
DOI:
Gene/Protein information
Gene sequence:
ATGTCGTCATCTATACGCAGAACCACTAATTCAGACGCATTGACTCGGTTAGCTCAGGCTATTGCCGTAGCCGTGAGCGCCACGCTTGCCGGCTGCCAGACCACTAGCCACGTCGAACCCAGCAGTAGCCACCGCGCGCCCAATCTGGCCGCGGGCATCAAGCAAAAACCGATCTTTCTTACCCATAAACCTGCCCCGCTTGCGCCACCGCAAGATGTCTGGGAGCGGATGCGTCAGGGCTTTCAGTTGCAACAAGGCAACGACCTGAACCCACGCATCGATCAGCAACGCCTCTGGTTTGCCAACAATCCGTCGTTCCTGGAAAACGCCGGCGAGCGCGGCAGCCTTTATATGCACTACATCGTCGAGCGTCTTGAAGAGCGCAACATGCCGCTGGAACTGGCGCTGCTGCCCGTTATCGAGAGCGCCTACAACCCAATGGCCGTGTCGCGCAGCAAAGCCGTCGGCCTGTGGCAGTTCATCCCGTCGACCGGACGCTACTTCAACCTGCGCCAGACCAGCTTCTACGATGGCCGCCGTGACATCCAGGCTTCCACCGTTGCAGCCATGGACTACCTGACGCGTCTGCACGACATGTTCAATGGCGACTGGCTGCTGGCGCTGGCTGCTTATAACGCTGGCGAGGGCACGGTCAGCCGGGCCATCGAGCGTAACGAAAAGCTTGGCCTGCCAACCGATTACTGGAACCTGCCCCTGCCGCAGGAAACCAAGGACTACGTACCCAAGCTGCTGGCCCTGTCCCAAGTGGTACTTGCGCCCGAAGCCTACGGCGTCAACCTTAACCCGATTGCCAACGAACCCTATTTCGAAGTCGTCGAACTGAACCAGCGCATGGACCTGTCCAGAGTCGCCGCGATGGGTAACATCGACGAAGACGAACTGATCCAGCTCAACCCGGCATTCAAGAAGCACATGACTATCGATGGCCCCAAGCACCTGTTGGTGCCGACGGCCAAGAAGCAGTTGCTGACTGCCAATCTGTCGAACATGAAGCCTCAGGAACTGGTTGACTGGCAGCAGTATCGGGTTCGCAAAGGCGACACACTTGCCAGCCTGGCCAGCCGCTATCAGGTTTCGGTCAGTTCGCTGAAAAGCAGCAACAAGCTGTCCGGCAACAGCCTGCGTGTGAGTCAGTCGCTGAGTATTCCGACTCAGCCGGGCATGACACCTTCAAAACCGGTGTTCGAAGAACTGGCGCGTAACGAAAAACCTGCACGCAGCAGAAATTACACCGTCAAGAGCGGTGAAAACCTGTCAATCATCGCCAAGGCCAACAAAGTCGACGTCAAGGATCTGCAGCGCTGGAACAAGCTTTCCGGACAGAACCTGAAGGTCGGTCAGACGCTGGTGATGGAAGACAACACCCCGAAAGCCAAAACCACTGCGACCGCAAGCGCAGCCCCGGCTGACAAGAAGTCCATGCAGTACAAGATCCAGAAAGGTGACTCGATGTATTTGGTCGCCAAGCGCTTCAACGTTGAAATGCAGCATCTCAAACGCTGGAACCCGCGCAGCGGTTCAGCACTCAAGCCGGGCCAGACCCTGACTGTTTATCTGCCGCATTGA
Protein sequence:
MSSSIRRTTNSDALTRLAQAIAVAVSATLAGCQTTSHVEPSSSHRAPNLAAGIKQKPIFLTHKPAPLAPPQDVWERMRQGFQLQQGNDLNPRIDQQRLWFANNPSFLENAGERGSLYMHYIVERLEERNMPLELALLPVIESAYNPMAVSRSKAVGLWQFIPSTGRYFNLRQTSFYDGRRDIQASTVAAMDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNEKLGLPTDYWNLPLPQETKDYVPKLLALSQVVLAPEAYGVNLNPIANEPYFEVVELNQRMDLSRVAAMGNIDEDELIQLNPAFKKHMTIDGPKHLLVPTAKKQLLTANLSNMKPQELVDWQQYRVRKGDTLASLASRYQVSVSSLKSSNKLSGNSLRVSQSLSIPTQPGMTPSKPVFEELARNEKPARSRNYTVKSGENLSIIAKANKVDVKDLQRWNKLSGQNLKVGQTLVMEDNTPKAKTTATASAAPADKKSMQYKIQKGDSMYLVAKRFNVEMQHLKRWNPRSGSALKPGQTLTVYLPH
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
59010.4 528 9.63 -0.468 44.97
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.