Effector profile
PlantPEAD ID: PlantPEAD17867 Uniprot ID: A0A246FAE8 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 46680 Pathogen type: Bacteria
Species: Pseudomonas nitroreducens Strain: DF05 Other name:
Gene name: NCBI Gene ID: NJBA01000003
Entry name: A0A246FAE8_PSENT Protein name: Lytic transglycosylase
DOI:
Gene/Protein information
Gene sequence:
ATGCCGCCCAAGACCAGAAAGACCTCCGATCTAGACGCATTGGCACGCGCCATCCGAGTCTCCATTGTCCTGCTCGCGGCGGGCCTGGCGGGTTGCCAGTCGACCCAGCAGACCGCCAGTGACAGCCAGGTCCGCAGCGCTTCCCGCGCCGTCGACGTGCAGTTCAACCCAGCCTGGAACCAGGCCCAGAACGATATCTGGGAACGCATGCGTGGCGGCTTCCAATTGCAGGACCAGCTCAATACCAACCCGCGTATCGAGCGTCAGCGCCTGTGGTTCATGAGCAACCAGTCGTTCCTGGAAAACGCCAGCGAGCGCGGTGCGCCATACATGCACTACGTCGTCGAGCGCCTGGAAGAGCGTGATATGCCGCTGGAGCTGGCGCTGCTGCCGATGATCGAGAGCTCGTACAACCCGATGGCCGTGTCGCGCGCCCAGGCCGTTGGCCTGTGGCAGTTCATCCCGAGCACCGGCACGCACTTCAACCTGCGCCAGACCAACTTCTATGACGGCCGTCGCGACATCACCGCGTCGACCAACGCCGCGCTGACCTACCTGACCCGCCTGCACGACATGTTCAACGGCGACTGGCTGCTCGCGCTGGCCGCCTACAATGCCGGTGAAGGCACCGTCAGCCGCGCGATCGAACGCAACGAGCGTCTCGGCCTGCCCACCGACTACTGGAACCTGCCGCTGCCCCAGGAAACCCAGGACTATGTGCCCAAGCTGCTGGCCCTGTCGCAGCTGGTGAATGCCCCGACCATCTACGGCATCAACCTCAGCCCGATCGCCAACCAGCCCTACTTCACCTCGATCCGCGTCAAGCCGGGCCTGGATCTCTCCCAGGTCGCCGCGGTCGCCGACCTGGACCAGGACGAACTGCAACAGCTCAACCCAGCCTTCAAACGCGGCGTGACCCTGGACGGTCCGCACCACCTGCTGGTGCCGCTGGCCAAGGCCGACTCCCTTAAAGCCGGGGTCGCGAACCTGCAGCCGGTCGAACTCAAGCCGCTGGCGGCAACCGTGGCCAGCTCGGGCAGCCGCTACCGTGTACGCAAGGGCGATAGCCTGCACAGCATCGCCCAGCGCTACCGCCTGAGCGTGGCCGAGCTCAAGGCAGCCAACCGCCTGAGCGCGAACCGCCTGCGCAACGGCCAGACCCTGGTCATCCCCGGCCAGCCCGGCCGCCCGACCATCGAGCCGGAAAGTCCGCGCCAACTGGCGCAGGTGGAAAGCTCGAAGACCGTCGCCAGCGCCCGCGTCGCCACCCGCAGCTACACCGTGAAGAACGGCGACACGCTGTGGAGCATCGCCAAGAAAAACAGCGTCGCGGTCGCGGACCTCAAGCGCTGGAACGGCCTGGACAGCCATGGCGTCAAGCCCGGCCAGACGCTCAAGCTGCAGAGCGCCGCAGCCACCCAACTGGCTTCCAGCAGCAAGAGCAAGGCCAAGCAGGACACCGCGACCTACTACAAGGTCAAGCAGGGCGACTCGATATCCATGATCGCCAAGCGCTTCAACGTCGAGACGCAACATATCCAGCGGTGGAACCCGCGCACCGGCAAGGCCCTGAAGCCCGGCCAGACGCTGACCCTGTACCTCGGCACCGCCAGCCGCTGA
Protein sequence:
MPPKTRKTSDLDALARAIRVSIVLLAAGLAGCQSTQQTASDSQVRSASRAVDVQFNPAWNQAQNDIWERMRGGFQLQDQLNTNPRIERQRLWFMSNQSFLENASERGAPYMHYVVERLEERDMPLELALLPMIESSYNPMAVSRAQAVGLWQFIPSTGTHFNLRQTNFYDGRRDITASTNAALTYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNERLGLPTDYWNLPLPQETQDYVPKLLALSQLVNAPTIYGINLSPIANQPYFTSIRVKPGLDLSQVAAVADLDQDELQQLNPAFKRGVTLDGPHHLLVPLAKADSLKAGVANLQPVELKPLAATVASSGSRYRVRKGDSLHSIAQRYRLSVAELKAANRLSANRLRNGQTLVIPGQPGRPTIEPESPRQLAQVESSKTVASARVATRSYTVKNGDTLWSIAKKNSVAVADLKRWNGLDSHGVKPGQTLKLQSAAATQLASSSKSKAKQDTATYYKVKQGDSISMIAKRFNVETQHIQRWNPRTGKALKPGQTLTLYLGTASR
Protein structure:
NONE
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
59535.6 539 9.89 -0.419 44.22
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.