Effector profile
PlantPEAD ID: PlantPEAD17872 Uniprot ID: A0A266LT55 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 296 Pathogen type: Bacteria
Species: Pseudomonas fragi Strain: F1820 Other name:
Gene name: NCBI Gene ID: NQKL01000009
Entry name: A0A266LT55_PSEFR Protein name: Lytic transglycosylase
DOI:
Gene/Protein information
Gene sequence:
ATGTCGTCATTTAAAGGTAACTCCATCAATTCAGACGCATTGACGCGCTTGGTTAAAGCCATCGCGGTGGTTGTGTCCGCCACTCTCGCGGGCTGCCAGTCCATGGATCATTCGGCGCAAACCACCGAACGGGCCAGCCTTAAAATCGCCAAACGAATTCCACAGGATCCACTCTGGCTCAGCCAGAAGCCCAGCCCCCTGCCTCCACAAGACGTATGGGAGCGCATGCGCCAGGGCTTCAAGTTGCAGGACGGCCAGAACGTCAACCCCCGAATTGAACAGCAGCGCCTGTGGTTTGCCAGCAACCCGTCGTTTCTCGAAAACGCGGGTGAGCGCGGCAGCCTTTATATCCACTACATCGTGGAGCGCCTCGAAGAACGCAACATGCCGCTGGAACTGGCCTTGCTGCCAGCCATCGAAAGCGCCTACAACCCAATGGCGTACTCCCACGCCAATGCGGTCGGGCTCTGGCAATTCATTCCCTCGACCGGCCGTTACTTCAACCTGCGCCAAACCCGGGCCTATGACGGTCGTCGTGATATCACGGCCTCGACCCTCGCCGCCCTGAACTACCTGAACCGTCTGCATGACATGTTCAACGGTGACTGGCTGCTGGCCCTGGCGGCTTACAACGCCGGCGAAGGCACGGTCAGCCGGGCCATCGAGCGCAATGAAAAGCTCGGCTTGCCTACCGACTACTGGAACCTGCCACTGCCCCAGGAAACCAAAGACTACGTGCCAAAACTACTGGCCCTGTCGCAAGTGGTTCTGGCCCCTGAAGCCTACGGCATCAACCTCAACCCGATCGCCAACGAACCCTACTTCGAAATGGTCGAGATCAAGCAGTCCATGGACCTGTCCCGCGTGGCAGCCCTGGCCGAGATCGACGAAGACGAGATGTTCCAGCTCAACCCTGCCTACAAGCAGCGCGCCACCACCGACGGCCCGCAGCACCTGCTGGTGCCCACGGCCAAAGCCCAGCTGTTGACCGCCAGCCTGTCCAATCTCAGCTCCGACCAACTGGTCAGCCTGCGCCCCAACAAGCCGGTGTTTGACAAGGTGGCAAGCACATCCCCAGCCCGCCTGAACCGCAAGTACCGGGTTAAAAGCGGCGACAACCTGACCCTGATTGCAAAGGCCAACAAGGTCAATGTCAAAGACCTGCAGCACTGGAACAAGCTCAGTGGCAACAACCTCAAGGCCGGGCAGATCCTGGTCATGCAGGACACGCGCAAACCGTCAGGCCGCAAGCCTACGCAATACAAGGTACAGAAAGGCGATTCGCTGTATATCGTTGCCAAGCGTTTCAACGTTGAGATGCAACATCTCAAGCGCTGGAATCCCAACAGCGCCAAAGCCCTCAAGCCGGGGCAAATGCTGACCGTTTCCAAGCCGCGATAA
Protein sequence:
MSSFKGNSINSDALTRLVKAIAVVVSATLAGCQSMDHSAQTTERASLKIAKRIPQDPLWLSQKPSPLPPQDVWERMRQGFKLQDGQNVNPRIEQQRLWFASNPSFLENAGERGSLYIHYIVERLEERNMPLELALLPAIESAYNPMAYSHANAVGLWQFIPSTGRYFNLRQTRAYDGRRDITASTLAALNYLNRLHDMFNGDWLLALAAYNAGEGTVSRAIERNEKLGLPTDYWNLPLPQETKDYVPKLLALSQVVLAPEAYGINLNPIANEPYFEMVEIKQSMDLSRVAALAEIDEDEMFQLNPAYKQRATTDGPQHLLVPTAKAQLLTASLSNLSSDQLVSLRPNKPVFDKVASTSPARLNRKYRVKSGDNLTLIAKANKVNVKDLQHWNKLSGNNLKAGQILVMQDTRKPSGRKPTQYKVQKGDSLYIVAKRFNVEMQHLKRWNPNSAKALKPGQMLTVSKPR
Protein structure:
AlphaFold
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
52362 466 9.64 -0.456 42.49
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.