Effector profile
PlantPEAD ID: PlantPEAD17889 Uniprot ID: A0A2K4W9X9 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: CFBP6411 Other name:
Gene name: NCBI Gene ID: LT963408
Entry name: A0A2K4W9X9_9PSED Protein name: Lytic transglycosylase
DOI:
Gene/Protein information
Gene sequence:
ATGCGTTGTGTGCGGCAATCTCGGTTTCAAAAGGGAACCGTAACGGCGAGCGCGCCACGTAGGGTGGACACGCTCAGGACATTCCCGCCCATGCCCGCCGTCGCCTTCCCCGTATCGAGCCCTCGCTTGCTGGCTCGCGCTGTTCAAATCGCAGTCCTCGCTATGGGTGCCTTGTGTGTGGGCTGCCAGTCTGTGGACTATTCGCCGCCGCGTCAGGACCGTCCGCCGCGGCTGGTGTCGGGGCTGGTCTATTGGGGGGGAGACGATCAGGAAGGTTCGCGGACTGCAGACAAAATCTCCGATCTGCCTGTTTATAACGGCGAGGACGTGTGGCAGCGGGTTGCCCAGCGCTGCAGGCTGGTCGATGGCCAGGGCATGAATGAGCGTATCGCTCGCCAGCGCGACTGGTTGCTGAGCAATCGCGGGTTTATCACGGGGGCCAGTGTCCGGGCCAGCCCGTACCTGCATTTTATTGTCGAGCGCCTGGACGAGCGCAACATGCCGCTGGAGCTGGCGCTGCTGCCGATGATCGAAAGCTCTTATAACCCCATGGCTAACTCTCCGGCCGCTGCGGCAGGTTTGTGGCAATTCATTCCATCCACGGGGCGCAGCTTCAATCTGCATCAAAGCGCGACCTACGATGCTCGCCGTGACGTGGTGGCCTCCAGCAAGGCGGCGATGGACTACCTGACCCGCTTGCATGATCAGTTCAATAATGACTGGCTGTTGGCGCTGGCCGCCTATAACGCGGGTGAGGGCACCGTCGGTCGTGCGATCGAGGCCAACCGACGGCGTGGTCTTCCTGTTGACTACTGGAACCTGAATTTACCCAAGGAAACCCAGGATTACGTGCCCAGACTGTTGGCGCTCTCAATGGTTGTGCGCAACCCCAATGCCTACGGTGTGAAACTGACCCCGGTCGCCAACACGCCGTATTTTGACGTAGTCCAGCTCAACCATGCCGTAGACCTGACCCAGCTCGCGGCCACGGCGGGTGTGGATGAGGGCCAGTTGTTGCGGCTCAACTCGGCATTCCTGCGCAAAAAGACCTTCGATGGACCGGGACGTCTGCTGATACCCAAAACCCAGAATCGGGTGCTGACGACCAGCATCGCGCGCATTACCGGTGAATCCCCGGTGACTGCCAGCACCCCGGTGGTCACCCCTTCAGCCATTGTGAAACGGGCGGCTGAGCGTCTACCCGCGCCCGGGCCTGTGGCTGAGCGTCCAGTGCGCGTTGCAGAGCGTCCGCCGCTGCCCAAGCCCGTGCAGTCGGCTCAGTTAGCCGAGAACCTGCCTTCGCCCAAAACGGCTCAGCCGTCGCCGGTGGCGGAGCAGCCCACCGCGCTTGAGGCGTCACAGCCAGTTCCTGCAGCTGAATCCACGCCGGCGGTAGAGATCGCCCAATCCGCACCTGTCGTGGAACCTGATCCGCTTACAAACCGGATACAGTTGCCCCGCATCAGGGATGACCGTTCGTCGCCTCGCAAGCGTGACGACGACGAGTATCGCAGCGGTCCGCGCGAGCTGCCCTCGGGGCCGCGCGTCGTGGTTTTTGCGAGTGATCCACGCCAATAA
Protein sequence:
MRCVRQSRFQKGTVTASAPRRVDTLRTFPPMPAVAFPVSSPRLLARAVQIAVLAMGALCVGCQSVDYSPPRQDRPPRLVSGLVYWGGDDQEGSRTADKISDLPVYNGEDVWQRVAQRCRLVDGQGMNERIARQRDWLLSNRGFITGASVRASPYLHFIVERLDERNMPLELALLPMIESSYNPMANSPAAAAGLWQFIPSTGRSFNLHQSATYDARRDVVASSKAAMDYLTRLHDQFNNDWLLALAAYNAGEGTVGRAIEANRRRGLPVDYWNLNLPKETQDYVPRLLALSMVVRNPNAYGVKLTPVANTPYFDVVQLNHAVDLTQLAATAGVDEGQLLRLNSAFLRKKTFDGPGRLLIPKTQNRVLTTSIARITGESPVTASTPVVTPSAIVKRAAERLPAPGPVAERPVRVAERPPLPKPVQSAQLAENLPSPKTAQPSPVAEQPTALEASQPVPAAESTPAVEIAQSAPVVEPDPLTNRIQLPRIRDDRSSPRKRDDDEYRSGPRELPSGPRVVVFASDPRQ
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
57593.6 525 9.63 -0.359 50.04
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.