Effector profile
PlantPEAD ID: PlantPEAD17895 Uniprot ID: A0A2N1CTH1 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 286 Pathogen type: Bacteria
Species: Pseudomonas Strain: sp. Choline-3u-10 Other name:
Gene name: NCBI Gene ID: PJBG01000063
Entry name: A0A2N1CTH1_9PSED Protein name: Lytic transglycosylase
DOI:
Gene/Protein information
Gene sequence:
ATGGTGCAGGACACCCTGTGGCTCACGGAGAAAGCGCCCGCCGAGCCGACCCATGCGGACATATGGGATCGCATCAGGCATGGATTCAAGCTACAGGACCATCTGGAAAGCAATCCGCGCATCGAGCAACAGCGCCTCCTTTTTTCCAGCCGACCGAATTCCATCGAGATGGCAAGCGAGCGAGGCAGCCCTTACATCCATTACATCGTCGAACAGCTCGAAGAACGCGACATGCCCCTCGAGCTGGCACTGCTGCCCATTATCGAGAGCGCGTACAACCCGTTTGCTTATTCTCCAGCTCAGGCAGTCGGCCTTTGGCAGTTCATTCCTTCGACAGGCCGCCACTTTAATCTGCAACAGACCAGCTGGTATGACGGCAGACGCGACATCACCGCGTCCACCACCGCAGCGCTGCGCTATCTGACCTATCTGCATGGGCTGTTCAGCGACGACTGGTTGCTTGCGCTGGCTGCCTATAACGCCGGCGAGGGAACCGTCAGCCGCGCCATCGAGCGAAACCAGAAGCTCGGCCTGCCGACGGACTACTGGAATCTGCCCCTTCCTCGAGAAACGCGCGATTACGTACCAAAACTGCTGGCGCTTTCGCAGATGGTGCAAAGCCCTGATGCATATGGACTGAATCTGAACCCCATCGCTAACGAGCCCTATTTTGAAGTAGTCGCGTTAAAACAGCGCATGGAGCTCGCCAGGGTCGCCGACATGGTGGATCTGGACGAAGACGAGATCTACCAGCTGAACCCCGCGTTTACTCGGCGTATTACGCTGGACGGCCCGCAGCACCTGCTGGTCCCAAGCGACAAGGCCGAGATGTTTGCGGCCAACCTTGCGCTGATGAAACCGCAGGATATGGTTGACTGGCAGCAATACAAGGTACGTCCTGGTGACACGCTGGGCGCAATCGCCAACCGGCATCGCCTATCAGTCAACATCATTCGTGATATCAATCGCCTGCGCAGCGATCACCTGCAGATCGGGCAAGTGCTGAGCATTCCGCAATCAGCCGGCGCGGCACAGTCTCAGGAATTGCTCCACGCGGTTGCGAGAAGCCAGCCGGCACCGCGTAGCTACCGGGTGCGCCAAGGTGACAACCTCTGGGATATCGCCAAAGCACAGAAGGTTTCGGTCCGTGATCTGCAGCGCTGGAACAACCTGTCAGGCAGCAATCTCAAAGTTGGACAGGCACTCTTTCTCCAGGCTGCCGGCAATAACCAGCAGACCAAACCCGCGCCGACCTACTACAAGGTCAAGAAAGGTGATTCGCTTTATGTGATCGCCAAACGCTTCAATGTTCAAGTCAACAACTTGAAGACCTGGAACCCCAGAGACAGCGCGATGCTCAAACCGGGCCAGACCCTTACGCTGTACATTCCACGCTGA
Protein sequence:
MVQDTLWLTEKAPAEPTHADIWDRIRHGFKLQDHLESNPRIEQQRLLFSSRPNSIEMASERGSPYIHYIVEQLEERDMPLELALLPIIESAYNPFAYSPAQAVGLWQFIPSTGRHFNLQQTSWYDGRRDITASTTAALRYLTYLHGLFSDDWLLALAAYNAGEGTVSRAIERNQKLGLPTDYWNLPLPRETRDYVPKLLALSQMVQSPDAYGLNLNPIANEPYFEVVALKQRMELARVADMVDLDEDEIYQLNPAFTRRITLDGPQHLLVPSDKAEMFAANLALMKPQDMVDWQQYKVRPGDTLGAIANRHRLSVNIIRDINRLRSDHLQIGQVLSIPQSAGAAQSQELLHAVARSQPAPRSYRVRQGDNLWDIAKAQKVSVRDLQRWNNLSGSNLKVGQALFLQAAGNNQQTKPAPTYYKVKKGDSLYVIAKRFNVQVNNLKTWNPRDSAMLKPGQTLTLYIPR
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
52933.2 465 8.76 -0.452 50.18
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.