Effector profile
| PlantPEAD ID: PlantPEAD17903 | Uniprot ID: S6SSB4 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. actinidiae ICMP 18807 | Other name: |
| Gene name: | NCBI Gene ID: AOKG01002470 | |
| Entry name: S6SSB4_PSESF | Protein name: Membrane-bound lytic murein transglycosylase D | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCCCGCCGTCGCCTTCCCCGTATCGAGCCTTCGCTTGCTGGCTCGCGCTGTTCAAATTGCAGTCCTCGCTATGGGCGCTCTGTGTGTGGGCTGCCAGTCTGTGGACTATTCGCCGCCGCGTCAGGACCGTCCGCCGCGGCTGGTGTCAGGGTTGGTCTATTGGGGGGGAGACGATCAGGAAGGTTCGCGGGCTGCAGACAAAATCTCCGATCTGCCTGTTTATAACGGCGAGGACGTGTGGCAGCGGGTTGCCCAGCGCTGCAGGCTGGTCGATGGCCAGGGCATGAATGAGCGTATTGCTCGCCAGCGCGACTGGTTGCTGAGCAATCGCGGGTTTATCACGGGGGCCAGTGTCCGGGCCAGCCCGTACCTGCATTTTATTGTCGAGCGCCTGGACGAGCGCAACATGCCGCTGGAGCTGGCACTGCTGCCGATGATCGAAAGCTCTTATAACCCCATGGCCAACTCTCCGGCCGCTGCGGCAGGTTTGTGGCAATTCATTCCATCCACGGGGCGCAGCTTCAATCTGCATCAAAGCGCGACCTACGATGCTCGCCGTGACGTGGTGGCCTCCAGCAAGGCGGCGATGGACTACCTGACCCGCTTGCATGATCAGTTCAATAATGACTGGCTGTTGGCGCTGGCCGCCTATAACGCGGGTGAGGGCACCGTCGGTCGTGCGATCGAGGCCAACCGACGGCGTGGTCTTCCTGTTGACTACTGGAACCTGAATTTACCCAAGGAAACCCAGGATTACGTGCCCAGACTGTTGGCGCTCTCAATGGTTGTGCGCAACCCCAATGCCTACGGTGTGAAACTGACCCCGGTCGCCAACACGCCGTATTTTGACGTAGTCCAGCTCAACCATGCCGTAGACCTGACCCAGCTCGCGGCCACGGCGGGTGTGGATGAGGGCCAGTTGTTGCGGCTGAACTCGGCATTCCTGCGCAAAAAGACCTTCGATGGACCGGGACGTCTGCTAATACCCAAAACCCAGAATCGCGTGCTGACGACCAGCATCGCGCGCATTACCGGCGAGTCCCCGGTGACTGCCAGCACCCCGGTGGTCACCCCTTCAGCCATTGTGAAACGGGCGGCTGAGCGTCTGCCCGCACCTGTGGCT
Protein sequence:
MPAVAFPVSSLRLLARAVQIAVLAMGALCVGCQSVDYSPPRQDRPPRLVSGLVYWGGDDQEGSRAADKISDLPVYNGEDVWQRVAQRCRLVDGQGMNERIARQRDWLLSNRGFITGASVRASPYLHFIVERLDERNMPLELALLPMIESSYNPMANSPAAAAGLWQFIPSTGRSFNLHQSATYDARRDVVASSKAAMDYLTRLHDQFNNDWLLALAAYNAGEGTVGRAIEANRRRGLPVDYWNLNLPKETQDYVPRLLALSMVVRNPNAYGVKLTPVANTPYFDVVQLNHAVDLTQLAATAGVDEGQLLRLNSAFLRKKTFDGPGRLLIPKTQNRVLTTSIARITGESPVTASTPVVTPSAIVKRAAERLPAPVA
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 41146.1 | 375 | 9.37 | -0.151 | 40.27 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR023346,IPR010511,IPR000189,IPR008258
Pfam: PF06474,PF01464
SMART:
KEGG:
PRINTS: