Effector profile
PlantPEAD ID: PlantPEAD17926 Uniprot ID: C6DC68 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 554 Pathogen type: Bacteria
Species: Pectobacterium carotovorum Strain: subsp. carotovorum strain PC1 Other name: Erwinia carotovora subsp. carotovora
Gene name: NCBI Gene ID: CP001657
Entry name: C6DC68_PECCP Protein name: peptidoglycan lytic exotransglycosylase
DOI:
Gene/Protein information
Gene sequence:
ATGAAGGCTAAAGCGATAATCATCGCCTCAGTCTTGCTGGCGGGTTGTCAGGTTTCCCCCCATGACACCTCGCAACCCAAACAGCATGCACAGAGTTTGTCTTCGGCAAGTCAAGGTGAAGCAGGAAAGTACACAGATGGTCGAGAGGCCTCTGCGCGATGGCTAGATGACGATAGCCTCGCGCAACGAGATCTGTGGAACTTCATTGGCGACGAGCTGAAGATGGAGGTTCCGGATAACGCCCGGATCCGCGAGCAAAAAACGCGTTATTTGAAAAATAAGAGCTATCTCCACGATGTAACATTACGGGCAGAGCCGTACATGTACTGGATAGTCGAGCAGATTAAGCAACGTAAAATGCCGATGGAACTGGTACTGCTACCCATAGTGGAGAGCGCTTTTGATCCAAGTGCCACATCATCCGCCAACGCCGCTGGGCTATGGCAGATTATCCCTGGCACAGGACGTAATTATGGTTTGAAGCAGAACCAATGGTACGACGGACGTCGCGATGTGATTGCATCCACGACGGCAGCACTGGATATGATGCAGCGGCTCAACACCATGTTTGATGGCGATTGGTTATTAACCGTTGCTGCTTATAACAGTGGTGAAGGCCGCGTTATGCAGGCGATGAAAGCGAATAAAGCGAAAGGGAAATCAACCAACTTCTGGGCACTGGCGTTACCGCGTGAAACGTCAATTTATGTTCCTAAGATGCTGGCCTTGAGCGATATTCTGAAAAACAGTAAGAAGTACGGCGTGAATCTGCCGCAACCCAATGAAAGCCGCGCATTAGCAAAGGTTGAGTTGGGACAGCAGATAGAACTGACACAAGCCGCTGAGATGGCTGGTCTGTCGTTGAATAAGCTAAAGAGCTATAACTCGGGCTATAAGCGTAATGTAACCGCACCAAATGGGCCACATTACATTATGGTTCCTAAAGCTCACGTTGAGCAGTTGAAAGATTCACTGGCTGATGGAGACATCGCAGCGATTCAACCAACACGCTTGGCACAAGCACAGACAACGCCAGTATCACAGCAGTATAAGGTACGTTCAGGTGATACCTTATCGGCAATTGCGGCACGGCTTAATGTCAGCACAAAAGATTTGCAGAGTTGGAACAATCTGCGTAGCGCTGGTGCGCTCAAGGTTGGTCAGACGCTACAAGTTGCCAAAGCTTCGGGCAGTAGCAGCTCTATCACCTATCAAGTTCGGAAGGGTGATTCGCTGGCAAGCATTGCTAAACGCCACGGCGTAAATATCGCTGATGTGATGCGCTGGAATACTGTTATCAACAAGAATGCCAACATCCAGCCAGGCGATCGTCTGACACTTTATGTTAGCAGCAATATAAAGCCTGATTCTTAA
Protein sequence:
MKAKAIIIASVLLAGCQVSPHDTSQPKQHAQSLSSASQGEAGKYTDGREASARWLDDDSLAQRDLWNFIGDELKMEVPDNARIREQKTRYLKNKSYLHDVTLRAEPYMYWIVEQIKQRKMPMELVLLPIVESAFDPSATSSANAAGLWQIIPGTGRNYGLKQNQWYDGRRDVIASTTAALDMMQRLNTMFDGDWLLTVAAYNSGEGRVMQAMKANKAKGKSTNFWALALPRETSIYVPKMLALSDILKNSKKYGVNLPQPNESRALAKVELGQQIELTQAAEMAGLSLNKLKSYNSGYKRNVTAPNGPHYIMVPKAHVEQLKDSLADGDIAAIQPTRLAQAQTTPVSQQYKVRSGDTLSAIAARLNVSTKDLQSWNNLRSAGALKVGQTLQVAKASGSSSSITYQVRKGDSLASIAKRHGVNIADVMRWNTVINKNANIQPGDRLTLYVSSNIKPDS
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
50325.3 457 9.61 -0.434 43.19
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.