Effector profile
| PlantPEAD ID: PlantPEAD17927 | Uniprot ID: A0A0H3HZ90 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1905730 | Pathogen type: Bacteria |
| Species: Pectobacterium parmentieri | Strain: SCC3193 | Other name: |
| Gene name: | NCBI Gene ID: CP003415 | |
| Entry name: A0A0H3HZ90_PECPM | Protein name: peptidoglycan lytic exotransglycosylase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTAAGAATCAGGTTTTATGTTGCTGCTAACATAAAGCGTCAGACGATCGCCTGGCTGGATGTTGGCATTCTTATTGATAACCGTATTCCAGCGCATCACATCAGCGATATTTACGCCGTGGCGTTTAGCAATGCTTGCCAGTGAATCACCCTTCCTAACTTGGTAGGTGATAGAACTGCTATTACCTGATGCTTTGGCAACTTGCAATGTTTGACCAATCTTGAGCGCACCAGCACTACGTAGATTGTTCCAGCTCTGCAAATCTTTCGTGCTGACATTAAGCCGCGCTGCGATTGCCGATAAGGTATCACCTGAGCGCACCTTATACTGCTGTGACGCTGGCGTTGACTGTGTTTGTGCTAAGCGTGTTGGTTGAATCGCCGCGATGTCACCATCAGCGAGTGAGTCTTTCAACTGCTCAACATGAGCTTTAGGAACCATAATGTAATGTGGCCCATTGGGTGCGGTTACATTACGCTTATAGCCCGAGTTATAGCTCTTCAACTTATTCAACGACAGGCCAGCCATCTCGGCGGCTTGAGTCAATTCTATCTGCTGTCCCAGTTCAACTTTGGCTAATGCCCTGCTTTCGTTGGGCTGTGGCAAACTCACGCCATACTTCTTGCTGTTTTTAAGAATATCGCTCAAGGCCAACATCTTAGGAACGTAAATGGACGTTTCACGCGGTAACGCCAATGCCCAAAAGCTGGTTGATTTCCCTTTTGCTTTATTTGCTTTCATCGCCTGCATGATTCGGCCTTCACCACTGTTGTATGCAGCAACCGTCAATAACCAGTCACCATCAAACATCGTGTTGAGCCGTTGCATCATATCCAGTGCAGCAGTCGTTGACGCAATTACGTCGCGACGCCCATCGTACCACTGGTTTTGTTTCAAACCATAATTACGTCCTGTACCAGGGATAATCTGCCATAGCCCAGCGGCATTGGCGGATGATGTGGCACTTGGATCAAAAGCGCTCTCCACTATGGGTAGCAGTACCAGTTCCATCGGCATCTTACGTTGCTTAATCTGCTCGACTATCCAGTACATGTACGGCTCTGCCCGTAATGTTACATCGTGGAGATAGCTCTTATTTTTCAAATAACGCATTTTTTGCTCGCGGACCCGGGCGTTATCCGGAACCTCCATCTTCAGCTCGTCGCCAATGAAGTTCCACAGATCTCGTTGCGCGAGGCTATCGTCATCTAACCATCGCGCGGAGGCCTCTCGGCTATCTGTGTACTTTCCTGCTTCACTTTGACTTGCCGAAGACAAACTCTGTGCATGCTGTTTCGGTTGCGAGGTGTCATGTGGAGATACCTGACAACCGACTAGCAAGACTGAGGCGATGATTATCGCTTTAGCCTTCAT
Protein sequence:
MKAKAIIIASVLLVGCQVSPHDTSQPKQHAQSLSSASQSEAGKYTDSREASARWLDDDSLAQRDLWNFIGDELKMEVPDNARVREQKMRYLKNKSYLHDVTLRAEPYMYWIVEQIKQRKMPMELVLLPIVESAFDPSATSSANAAGLWQIIPGTGRNYGLKQNQWYDGRRDVIASTTAALDMMQRLNTMFDGDWLLTVAAYNSGEGRIMQAMKANKAKGKSTSFWALALPRETSIYVPKMLALSDILKNSKKYGVSLPQPNESRALAKVELGQQIELTQAAEMAGLSLNKLKSYNSGYKRNVTAPNGPHYIMVPKAHVEQLKDSLADGDIAAIQPTRLAQTQSTPASQQYKVRSGDTLSAIAARLNVSTKDLQSWNNLRSAGALKIGQTLQVAKASGNSSSITYQVRKGDSLASIAKRHGVNIADVMRWNTVINKNANIQPGDRLTLYVSSNIKPDS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 50418.5 | 457 | 9.61 | -0.429 | 46.98 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR018392,IPR036779,IPR023346,IPR000189,IPR008258
Pfam: PF01476,PF01464
SMART: SM00257
KEGG: pec:W5S_1044,ppar:A8F97_13195
PRINTS: