Effector profile
| PlantPEAD ID: PlantPEAD17958 | Uniprot ID: A0A0E3UCG8 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 56448 | Pathogen type: Bacteria |
| Species: Xanthomonas arboricola | Strain: 17 | Other name: |
| Gene name: | NCBI Gene ID: CP011256 | |
| Entry name: A0A0E3UCG8_9XANT | Protein name: Lytic transglycosylase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAGGGTGTGTCTTCGAACGACAACACCATGCCGGGCTTCAACACGGCACGCTTGTCCAGGCCATTGCTGGTCAGCAGTGTCGTGACGGTCACGCCGTAGCGGCGTGCGATGGCCCAGGCCGATTCGCCGTTGCGGACCGTATGCGTGGTGCGCGCCTGTGGCCTGGAGGCATCCGTCGTCGCGGCGGCAACGACCGTGGGAGCGGCAGCGCTGTTGTCCGCAGTGCTGCCCGTGTCGGCAGATGCGACCGCGGCACCTGTCGCACCTGGCTGCGCAGGGGCGATCGGGGCGAGCACATGCACGCCCCGCGGTGCGGCGCGCGCGCTGGCCAGCGCCGGATTCAGCCGGGCCAGCAGCTGCGGCTCGATGTCGCGTTGTCCCGCAAAGGCGTTGAGACTGGTGCCGGCCGGCAATGCATGTTCGGTGAGTACCGGTACCGGGCGGTCGAGCGAGGTCAGCAGATTGCCCTGCTGCTGCGCATGGTCCAGCACACAGGCGAGCGCGTGCAGCTTTTCCACGTACTCGTAGGTGACCTTGGACATGCCGGGCAATTCGGACGGGCGAGCGTTCTGCGCGTTCATGCCGGCCGTGCGCATGGCCTGCAGCACGCGATACTCGCCCGCGTTGTAGGCCATCAGCGCCAGGCGCCAATCGCCGCCGAACATGCCATACAGCGTCTTGAGATAACGCACCGCCGCGGTGGTGGAGTCCACTGCCGAAAGGCGTCCGTCGTATTGCGCGCCAACCGGCACATGGTGGTTGCGCGCAGTGGTGGCGATGAACTGCCAGAGGCCGGCGGGGCCACTGCCGTTGCGGGCGCCCGGGCGATAACCGCTCTCGACGAACGGAATCAGCGCAAATTCGGTCGGCATGTCGGCTTCGCGCAATTCATCGACCACGTAGCCGAACAGCGGCAAGACATCCTGTGCGTCGTCTGCCAGACGGGCCGGCGCGCGCGAGAAATGTTGTTCCCAGCGGGTATCGCTATGTTCGCTGTCGCAGCCAGGATCGGCGCGACCGTCCAGGAACGACGAAAAGATCTCCCGACCGTTGCGCACCTGGGGTGTGGCGGTCTGGGCGATCGAGCTCTCTGCGGGTTTGGAGCGGCTTGCGTCGTTGGACGATGCGGCTGCGGGTGCGATGACCGCCGATGCGGTCAGCACTGCCAGAAGCAGGCGCCTCAT
Protein sequence:
MRRLLLAVLTASAVIAPAAASSNDASRSKPAESSIAQTATPQVRNGREIFSSFLDGRADPGCDSEHSDTRWEQHFSRAPARLADDAQDVLPLFGYVVDELREADMPTEFALIPFVESGYRPGARNGSGPAGLWQFIATTARNHHVPVGAQYDGRLSAVDSTTAAVRYLKTLYGMFGGDWRLALMAYNAGEYRVLQAMRTAGMNAQNARPSELPGMSKVTYEYVEKLHALACVLDHAQQQGNLLTSLDRPVPVLTEHALPAGTSLNAFAGQRDIEPQLLARLNPALASARAAPRGVHVLAPIAPAQPGATGAAVASADTGSTADNSAAAPTVVAAATTDASRPQARTTHTVRNGESAWAIARRYGVTVTTLLTSNGLDKRAVLKPGMVLSFEDTP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 41722.9 | 394 | 6.76 | -0.173 | 37.19 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR018392,IPR036779,IPR023346,IPR008258
Pfam: PF01476,PF01464
SMART: SM00257
KEGG: xar:XB05_00170
PRINTS: