Effector profile
| PlantPEAD ID: PlantPEAD17959 | Uniprot ID: A0A0G8ZC09 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 442694 | Pathogen type: Bacteria |
| Species: Xanthomonas perforans | Strain: LH3 | Other name: |
| Gene name: | NCBI Gene ID: JAAGYU010000087 | |
| Entry name: A0A0G8ZC09_XANPE | Protein name: Lytic transglycosylase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAGGCGCCTGGTTTTGACAGTGCTGGCCGTCTGTTCGGCCATCGCACCGGCAGCCGCATCGCCCAATGACGCAAGCTCCGCCCCCGCCAGTAGCCAGACCGCGCAAGCCAGCGCGCCAAGCCTCCGCAACGGGCGCGAGATTTTTTCGGCCTTCCTCGACGGTCGCGCCGACCCGGGCTGCGACAGCGCCCATAGCGATGCCCGCTGGGAACAGCATTTTTCGCGCGCCCCGGCACGTCTGGCAGACGATGCGCAGGATGTCCTGCCGTTATTCGGTTATGTCGTCGACGAGTTGCGTAAGGCCGACATGCCGACCGAATTTGCGCTGATCCCGTTCGTGGAAAGCGGCTACCGCCCCGGGGCCCGCAACGGCAGCGGCCCTGCCGGCCTGTGGCAGTTCATCGCGACCACCGCGCGCAACCACCAGGTGCCGGTCGGTGCGCAATACGACGGACGCCTGTCGGCAGTGGACTCCACCACTGCGGCGGTGCGCTATCTCAAAACCCTTTACGGCATGTTCGGCGGAGACTGGCGCTTGGCCCTGATGGCCTACAACGCCGGCGAGTACCGCGTGCTGCAGGCAATGCGCAGCGCCGGGATGAACGCGCAAAACGCACGCCCCTCCGAATTGCCGGGCATGTCCAAGGTCACCTACGACTATGTGGAGAAACTGCACGCACTTGCCTGCGTGCTGGATCACGCGCAACAGCAGGGCAACCTGCTGACGTCGCTGGATCGCCAGGTGCCCGTCCTCACCGAACATGCGTTGCCGGCAGGCACCAGTCTCAACGCCTGGGCCGGACAGCGCGCGATCGAGCCGCAACTGCTCGCGCGCCTGAATCCCGCCCTCGCTGGCGCGCGCGCTGCGCCGCGCGGCGTGCACGTGCTTGCGCCGCTTGCGCCGCCGCAGCCCGGTGCAAATAGCGCCATGGTCGCCTCTGCCGAGGTGGGAACTGGCGCCGCCAGCAGCACTCCCGCACCGACCGCCGTTGCCTCTGCAGCCAGCAAAGCGTCGACCTCGCCAGCACGTACCCACACCGTGCGCAATGGCGAATCGGCCTGGGCGATCGCACGCCGCTATGGCATCACCGTGACGACGCTGCTCGCCACCAATGGCCTGGACAAAAGCGCCATTCTGAAGCCTGGCATGGTGCTGTCGTTCGACGACTCGCCCTAA
Protein sequence:
MRRLVLTVLAVCSAIAPAAASPNDASSAPASSQTAQASAPSLRNGREIFSAFLDGRADPGCDSAHSDARWEQHFSRAPARLADDAQDVLPLFGYVVDELRKADMPTEFALIPFVESGYRPGARNGSGPAGLWQFIATTARNHQVPVGAQYDGRLSAVDSTTAAVRYLKTLYGMFGGDWRLALMAYNAGEYRVLQAMRSAGMNAQNARPSELPGMSKVTYDYVEKLHALACVLDHAQQQGNLLTSLDRQVPVLTEHALPAGTSLNAWAGQRAIEPQLLARLNPALAGARAAPRGVHVLAPLAPPQPGANSAMVASAEVGTGAASSTPAPTAVASAASKASTSPARTHTVRNGESAWAIARRYGITVTTLLATNGLDKSAILKPGMVLSFDDSP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 41078.4 | 392 | 8.76 | -0.095 | 41.82 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR018392,IPR036779,IPR023346,IPR008258
Pfam: PF01476,PF01464
SMART: SM00257
KEGG: xpe:BJD13_11450
PRINTS: