Effector profile
| PlantPEAD ID: PlantPEAD17995 | Uniprot ID: A0A2S7DHC4 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 56453 | Pathogen type: Bacteria |
| Species: Xanthomonas cucurbitae | Strain: CFBP2542 | Other name: |
| Gene name: | NCBI Gene ID: MDED01000043 | |
| Entry name: A0A2S7DHC4_9XANT | Protein name: Lytic transglycosylase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAGGGCGTATCGTTGAATGACAGCACCATGCCAGGCTTCAAGACCGCGCGCTTGTCCAGGCCATTGCTGGCGAGCAGGGTGGCGACCGTGATGCCGTAACGGCGCGCGATGGCCCAGGCCGATTCGCCATTGCGGACGGTGTGGGTCCTGGCGGCCGTGCTGGAGGCCTTGGCGGTGGCGACGCTGGCTACCGCTGCTGCGGTCGCGCTGCGATTGGAGTGGGTGTCGGGAGTCGGCGTGGCGGCAGCCACCACCGCTCCGCTGGAACCCGGCTGTGCGGCTGCAATGGGAGCAAGCACATGCACGCCCTTGGGCGCGGCGCGTGCGCCTGCCACGGCAGGGTTGAGGCGGGCCAGCAGTTGCGGCTCGATTGCGCGTTGTCCGGCCCAGGTGTTGAGGCTGGTGCCCGTGGGCAGGGCGTGTTCGGTCAGGACCGGAACCTGGCGGTCCAGGGAGGTCAACAGAGTGCCCTGTTGCTGCGCGTGATCGAGGACGCAGGCCAGCGCATGCAGTTTTTCGACATAGTCGTAGGTGACCTTGGAGATGCCCGGCAGCTCTGACGGACGCGCATTCTGCGCATTCATTCCGGCGCTGCGCATCGCTTGCAACACGCGGTACTCGCCGGCGTTGTAGGCCATCAGGGCCAGGCGCCAGTCGCCGCCGAACATGCCATACAGGGTCTTGAGGTAGCGCACCGCTGCATTGGTGGAGTCCACCGCCGACAGGCGGCCGTCGTACTGCGCGCCGACCGGGACATGGTGGTTGCGGGCCGTGGTAGCGACGAACTGCCAAAGTCCCGCCGGACCGCTGCCATTGCGCGCGCCGGGGCGGTAGCCGCTCTCGACAAAGGGAATCAGCGCAAATTCGGTGGGCATGTCGGCGGCGCGCAGCTCGTCGACCACATAGCCGAACAGCGGCAGCACATCCTGCGCATCGTCGGCCAGGCGCGCGGGCGCGCGCGAGAAATGCTGCTCCCAGCGGGTGTCGCTATGTTCGCTGTCGCAGCCGGGGTCGGCGCGGCCTTCCAGGAACGACGAAAAGATCTCGCGCCCGTTCCGCATGCTGGGAGCGCTGGTCGGGGCAGGTGTGCTCTCCACCGATGTCAGGCGCCCGGCGTCAGCGGACCAGGCAGCCGTCGATGTGGTGGCTGCACAGACGGCCAGCACTGCCAGAGCCAGGCGAATCAT
Protein sequence:
MIRLALAVLAVCAATTSTAAWSADAGRLTSVESTPAPTSAPSMRNGREIFSSFLEGRADPGCDSEHSDTRWEQHFSRAPARLADDAQDVLPLFGYVVDELRAADMPTEFALIPFVESGYRPGARNGSGPAGLWQFVATTARNHHVPVGAQYDGRLSAVDSTNAAVRYLKTLYGMFGGDWRLALMAYNAGEYRVLQAMRSAGMNAQNARPSELPGISKVTYDYVEKLHALACVLDHAQQQGTLLTSLDRQVPVLTEHALPTGTSLNTWAGQRAIEPQLLARLNPAVAGARAAPKGVHVLAPIAAAQPGSSGAVVAAATPTPDTHSNRSATAAAVASVATAKASSTAARTHTVRNGESAWAIARRYGITVATLLASNGLDKRAVLKPGMVLSFNDTP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 41580.9 | 395 | 8.76 | -0.084 | 30.85 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR018392,IPR036779,IPR023346,IPR008258
Pfam: PF01476,PF01464
SMART: SM00257
KEGG:
PRINTS: