Effector profile
| PlantPEAD ID: PlantPEAD18040 | Uniprot ID: A0A855NPJ1 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 56448 | Pathogen type: Bacteria |
| Species: Xanthomonas arboricola | Strain: CFBP 8152 | Other name: |
| Gene name: | NCBI Gene ID: MIGS01000001 | |
| Entry name: A0A855NPJ1_9XANT | Protein name: Lytic transglycosylase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAGGGCGTGTCGTCGAACGACAACACCATGCCGGGCTTTAGCACGGCGCGCCTGTCCAGGCCATTGCTGGCCAGCAGTGTCGTGACCGTGACGCCGTAGCGGCGTGCGATGGCCCACGCGGATTCGCCGTTGCGCACCGTATGTGTCGTGCGCGCCTGTGACTTGGATGCCTTCGTCGCCGCGGCGGCAACGAGCGTGGGAGCGGCCGCTTCGACGTCGGCGATGCCGCCCGTCTCGGCGGAGGCGGCCACGCTGCCTGTTGCACCTGGCTGCGCGGGCGCGATCGGGGCGAGTACGTGCACGCCGCGTGGTGCGGCGCGCGCGCCGGCCAGCGCCGGATTCAGCCGGGCCAGCAGTTGCGGCTCGATGGCGCGCTGTCCTGCAAAGGCGTTGAGGCTGGTGCCGACCGGCAACGCATGTTCGGTGAGTACCGAGACAGGGCGATCGAGCGAGGTCAGCAAGTTGCCTTGCTGCTGCGCATGGTCGAGCACGCAGGCGAGCGCGTGCAGCTTTTCCACGTACTCATAGGTGACCTTGGACATGCCGGGCAATTCGGACGGGCGAGCGTTCTGCGCGTTCATGCCGGCACTGCGCATGGCCTGCAGCACCCGATACTCCCCAGCGTTGTAGGCCATCAGGGCCAGGCGCCAATCGCCTCCGAACATGCCGTACAACGTCTTCAGATAACGCACCGCCGCCGTCGTGGAGTCCACTGCCGAGAGGCGGCCGTCGTATTGCGCGCCAACCGGCACATGGTGGTTGCGGGCAGTGGTTGCGATGAACTGCCAGAGGCCGGCGGGGCCGCTGCCATTGCGGGCTCCTGGTCGATAGCCGCTTTCGACGAATGGAATCAGCGCAAATTCGGTCGGCATGTCGGCTTCGCGCAATTCATCGACCACGTAGCCGAACAGCGGCAACACATCCTGTGCGTCGTCCGCCAGGCGAGCCGGCGCGCGCGAAAAATGTTGTTCCCAGCGTGTATCGCTGTGTTCGCTGTCGCAGCCGGGGTCGGCGCGGCCTTCCAGAAACAACGAAAAGATCTCTCGACCATTGCGCACCTGGGGTGCGGCGGTCTGGGTGATCGAACTTTCTGCGGGTTTGTAGCGGCTTGCGTCGTTGGACGATGCGGCTGCGGGTGCAATGACCACTGACGCGGTCAGCACTGCCAGAAGCAGGCGCCTCAT
Protein sequence:
MRRLLLAVLTASVVIAPAAASSNDASRYKPAESSITQTAAPQVRNGREIFSLFLEGRADPGCDSEHSDTRWEQHFSRAPARLADDAQDVLPLFGYVVDELREADMPTEFALIPFVESGYRPGARNGSGPAGLWQFIATTARNHHVPVGAQYDGRLSAVDSTTAAVRYLKTLYGMFGGDWRLALMAYNAGEYRVLQAMRSAGMNAQNARPSELPGMSKVTYEYVEKLHALACVLDHAQQQGNLLTSLDRPVSVLTEHALPVGTSLNAFAGQRAIEPQLLARLNPALAGARAAPRGVHVLAPIAPAQPGATGSVAASAETGGIADVEAAAPTLVAAAATKASKSQARTTHTVRNGESAWAIARRYGVTVTTLLASNGLDRRAVLKPGMVLSFDDTP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 41779.2 | 394 | 7.84 | -0.101 | 35.8 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR018392,IPR036779,IPR023346,IPR008258
Pfam: PF01476,PF01464
SMART: SM00257
KEGG:
PRINTS: