Effector profile
| PlantPEAD ID: PlantPEAD18049 | Uniprot ID: B0RTF0 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 339 | Pathogen type: Bacteria |
| Species: Xanthomonas campestris | Strain: pv. campestris strain B100 | Other name: |
| Gene name: | NCBI Gene ID: AM920689 | |
| Entry name: B0RTF0_XANCB | Protein name: Murein hydrolase D | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAGGCGCCTGCTTCTGGGTGTGTTGGCCGCTCTGTCGGCCGCCGCACCGGTCGCCGGCTCCGCCAGCGAGCCAAGCACCTCTTCCACCGTCAGCAGCCCAGCACCGGCCGTACGCAACGGCCGGGATATCTTTGCCTCCTTCCTGGAAGGACGTGCCGACCCGGGCTGCGATACCGAGCACAGCGATCGGCGTTGGGAGCAGCACTTCTCCCGCGCTCCGGCCCGCCTGGCCGATGATGGCCAGGACGTTCTCCCGCTGTTCGGTTACGTGGTCGACCAGCTGCGCGAAGCCGACATGCCCACCGAATTCGCCCTGATTCCCTTCGTGGAAAGCGGCTACCGGCCCGGCGCACGCAACGGCAGCGGCCCGGCAGGCCTGTGGCAATTCATCGCCACTACCGCGCGCAATCACCACGTGCCGGTCGGCGCCCAGTACGACGGCCGCCTGTCGGCGGTGGACTCCACCACCGCGGCAGTGCGCTATCTCAAGACCCTGTACGGCATGTTCGGCGGCGACTGGCGCCTGGCGCTCATGGCCTACAACGCTGGCGAATACCGCGTCTTGCAGGCCATGCGCAGCGCCGGCATGAATGCGCAGAACGCCCGGCCGGCCGAGTTGCCAGGCATGTCCAAGGTCACCTACGAATACGTGGAAAAGCTGCACGCGCTGGCGTGCGTGCTTGACCATGCGCAGGAGCAAGGGACCTTGATGACGTCGCTGGATCGCCCGGTGCCAGTGCTGACCGAGCACGCATTGCCGGCCGGCACCAGCCTCACCACCTGGGCTGGGCAACGCGCCCTGGAACCGCAACTGCTGGCCCGCCTCAACCCGGCAGTGGCCAGCGCCCGTGCAGCGCCGCGCGGCGTGCATGTGCTGGCGCCAATCGCGCCAGCACAACCGGGGTCAGCTGGCGCTGTTGTCGCCCTGGCCGATCGCGGCGCCCTTGCAGATACGGATGACGGCAATGCCACCACTGCGGTGGCCAGCGTCCAGACCTCCAAGCGCAGCAGCGCGCGCACGCACACCGTGCGTAATGGCGAGTCCGCATGGGCCATCGCCAAGCGCTACGGAATCACGGTCACCACGCTGCTTGCCAGCAATGGCCTGGACAAGCGCGCGGTGTTGAAGCCGGGCATGGTGCTGTCGTTCGAAGATTCGCCCTGA
Protein sequence:
MRRLLLGVLAALSAAAPVAGSASEPSTSSTVSSPAPAVRNGRDIFASFLEGRADPGCDTEHSDRRWEQHFSRAPARLADDGQDVLPLFGYVVDQLREADMPTEFALIPFVESGYRPGARNGSGPAGLWQFIATTARNHHVPVGAQYDGRLSAVDSTTAAVRYLKTLYGMFGGDWRLALMAYNAGEYRVLQAMRSAGMNAQNARPAELPGMSKVTYEYVEKLHALACVLDHAQEQGTLMTSLDRPVPVLTEHALPAGTSLTTWAGQRALEPQLLARLNPAVASARAAPRGVHVLAPIAPAQPGSAGAVVALADRGALADTDDGNATTAVASVQTSKRSSARTHTVRNGESAWAIAKRYGITVTTLLASNGLDKRAVLKPGMVLSFEDSP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 41035.4 | 388 | 7.85 | -0.131 | 39.11 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR018392,IPR036779,IPR023346,IPR008258
Pfam: PF01476,PF01464
SMART: SM00257
KEGG: xca:xcc-b100_3374
PRINTS: