Effector profile
| PlantPEAD ID: PlantPEAD18200 | Uniprot ID: A0A0B7FLI8 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1108050 | Pathogen type: Fungi |
| Species: Thanatephorus cucumeris | Strain: Rhizoctonia solani AG1-IB 7/3/14 | Other name: Rhizoctonia solani |
| Gene name: | NCBI Gene ID: LN679134 | |
| Entry name: A0A0B7FLI8_THACB | Protein name: Endo-beta-1,4-glucanase D | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAAGTCTGTTTTTGCGCTCGTTGCTCTCGCGGCTGCCGCCGTCCAGCCAGCTCTGGCCCACTATCGTTTCCCCAAGCTTATCGATAGCTCGGGTGCCGTAACCGGAGAGTACGTCTACGTACGTTCTAACACGAATATTAACTCGCCGCTGACCGATGTCACTTCGACTGACATTCGATGCAACGCTGGCGGCCTTACATCCGGAAGCAAGACATCCATCTCAAACGTTGCAGCTGGGTCGACCGTCGGCTTCCAGGCTGATATTCCTCTGACTCATCCTGGCCCCCTTTCGGTCTATCTTGGAAAGGTACCCTCGGGTCAAACCGCTGCGACTTGGGACGGAAGCGGTGCCAACTGGTTTAAGATCCACCAAATCGGCGCTGACTTCAAGACCGGTGCTTTGGCGTGGCCTACAGATAACGCACAGACCTTCAAGTTTAAGATTCCCTCATCAGTCCCTTCGGGGCAGTACCTACTTCGTGTTGAACATGTCGCTTTGCACGGCGCGTCCACCGTCGGCGGTGCCCAGTTCTACATAAGCTGCGCCCAAATCAACGTTACTGGGGGTGGCTCTGGAAACCCATCCAAGGTTTCGATTCCGGGTGCCTACTCAGCCACCGATCCCTCGGTCTTGATCAACATTTACTGGCCACCGGTCACCAGCTACACTCCTCCTGGCCCAGCAGTCTGGTCTGGCTGA
Protein sequence:
MKSVFALVALAAAAVQPALAHYRFPKLIDSSGAVTGEYVYVRSNTNINSPLTDVTSTDIRCNAGGLTSGSKTSISNVAAGSTVGFQADIPLTHPGPLSVYLGKVPSGQTAATWDGSGANWFKIHQIGADFKTGALAWPTDNAQTFKFKIPSSVPSGQYLLRVEHVALHGASTVGGAQFYISCAQINVTGGGSGNPSKVSIPGAYSATDPSVLINIYWPPVTSYTPPGPAVWSG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 24058.1 | 233 | 8.85 | 0.075 | 21.22 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR005103
Pfam: PF03443
SMART:
KEGG:
PRINTS: