Effector profile
| PlantPEAD ID: PlantPEAD18204 | Uniprot ID: M5BRF4 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1108050 | Pathogen type: Fungi |
| Species: Thanatephorus cucumeris | Strain: AG1-IB / isolate 7/3/14 | Other name: Rhizoctonia solani |
| Gene name: | NCBI Gene ID: CAOJ01005458 | |
| Entry name: M5BRF4_THACB | Protein name: Endo-beta-1,4-glucanase D | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAAATCCATATTTGCCCTTCTTGCGCTCGCTTTCATCCAGCCTGCTCTGGGCCACTATCGATTCTACAAGTATATTGATTCGGCTGGTACTGTGACTGGTGAATACCTCTACGTCCGAGCGAATACGAACACAAATTCTCCGGTGACGGATGTAGCATCTAACGATTTCAGGTGTAACGTCGGAGGACTTGCATCTGGGAGCAAGACTTCTATCGCCACCGCCGCCGCCGGCTCTACTGTTGGGTTCCAGGCAGACATTGGTTTGATTCATCCTGGCCCGACGCAAGTGTACCTCGGCAAAGTCCCCTCGGGGCAGACGGCGACAACTGGCTCATTGGCGTGGCCTTCAGATAACCAGCAAACGTTCAAATTCAAGATTCCTTCTAACACGCCGGCAGGGAATTACCTTCTGAGGATCGAACATATTGCTTTGCACGGCGCATCCACCGTTGGTGGCGCTCAATTCTACATAAGCTGTGCTCAGTTGTCGATCACGGGCAGCGGCAGCGGCAACCCGGCCAAAGTATCGATCCCAGGCGTTTACAAAGGAACCGAGCCTGGATTATTGATCAATATCTACTGGCCGCCTGTGACGAACTATACGATCCCTGGTCCTGCTGTCTGGTCTGGATAA
Protein sequence:
MKSIFALLALAFIQPALGHYRFYKYIDSAGTVTGEYLYVRANTNTNSPVTDVASNDFRCNVGGLASGSKTSIATAAAGSTVGFQADIGLIHPGPTQVYLGKVPSGQTATTGSLAWPSDNQQTFKFKIPSNTPAGNYLLRIEHIALHGASTVGGAQFYISCAQLSITGSGSGNPAKVSIPGVYKGTEPGLLINIYWPPVTNYTIPGPAVWSG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 22033.9 | 211 | 9.06 | 0.057 | 23.55 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR005103
Pfam: PF03443
SMART:
KEGG:
PRINTS: