Effector profile
| PlantPEAD ID: PlantPEAD18207 | Uniprot ID: M5C0M2 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1108050 | Pathogen type: Fungi |
| Species: Thanatephorus cucumeris | Strain: AG1-IB / isolate 7/3/14 | Other name: Rhizoctonia solani |
| Gene name: Cel1 | NCBI Gene ID: CAOJ01010705 | |
| Entry name: M5C0M2_THACB | Protein name: Endo-beta-1,4-glucanase D | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAGGCTTTTCATTGCAGCCGCTCTGGCACTGTCTACCCACGGAGTCTTTGGACATTATATATTCAACAAGCTCATTGTCAATGGTGTCACCGGGGGAGCATTTGCTAATATCCGCCCAGTCGCCAGTAATTCTCCCGTGGAAGATGTTTCATCAATTGACATGCGATGTAATGTTGGTGGTGCTAGCGGTAGTGGAACTACTACTACAACCTTCCCAGCAGGATCGACCATTGGGTTTGTACTTGACAATACTATTTATCATCCCGGTCCGCTTGCCGTCTATATGGGCAAGGCTCCTGCTACTGCCGCAGCCTGGGACGGTTCTGGCGCCAACTGGTTCAAGATCTATGAATTGGGAGCCGACTTTAATCCTTTCAAGTTTAAGGCGATGGATCAATCCACCTTTACCTTCAAAATCCCGAGCAGTATTCCGGCTGGCCAGTACTTGTTGCGTATTGAGCAAATTGGTCTTCACGTCGCTGGAGCTCCACAATACTATATCTCGTGCGCTCAGGTGTCTGTAACGGGGGGAGGTAGTGCCAATCCGACAAAGGTGTCCATCCCAGGATACGTTAGTAAGGATGACCCTAGTCTTACCGTTAACATTTGGTATCCTACGCCTACTGCCTACAAGGTACCCGGGCCTGCTGTGTTTAATGGATGA
Protein sequence:
MRLFIAAALALSTHGVFGHYIFNKLIVNGVTGGAFANIRPVASNSPVEDVSSIDMRCNVGGASGSGTTTTTFPAGSTIGFVLDNTIYHPGPLAVYMGKAPATAAAWDGSGANWFKIYELGADFNPFKFKAMDQSTFTFKIPSSIPAGQYLLRIEQIGLHVAGAPQYYISCAQVSVTGGGSANPTKVSIPGYVSKDDPSLTVNIWYPTPTAYKVPGPAVFNG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 23151.3 | 221 | 8.49 | 0.159 | 32.83 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR005103
Pfam: PF03443
SMART:
KEGG:
PRINTS: