Effector profile
| PlantPEAD ID: PlantPEAD18287 | Uniprot ID: A0A0K2IP52 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 40324 | Pathogen type: Bacteria |
| Species: Stenotrophomonas maltophilia | Strain: Cluster_DBSCAN_round3_0 | Other name: Pseudomonas maltophilia,Xanthomonas maltophilia |
| Gene name: | NCBI Gene ID: WNDS01000003 | |
| Entry name: A0A0K2IP52_STEMA | Protein name: UPF0234 protein GAK31_02372 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCCTTCCTTCGACGTTGTTTCCGAAGTCGATACGCACGAACTGACCAATGCCATCGACCAGGCCAACCGCGAACTGGCCACCCGTTTCGACTTCAAGGGCGTGGACGCCAAGTTCGAGCGCGACGGCGATGTGATCAACCAGACCGCGCCCACCGAGTTCCAGCTCAAGCAGATGAACGACATCCTGCGTGCACGGCTGGCCGCCCGTGGCATCGACGTTCTGAGCCTGGAGTTTGGCGATATCGAGACCAACCTGGCCCAGGCCCGGCAGAAGATCACCGTCAAGCAGGGCATCGAGCAGAAGATCGCCAAGAAGATCGCCGCGGCGCTGAAAGAAGCCAAGCTGAAGGTGGAAAGCCAGATCAACGGCGACAAGCTGCGCGTGCAGGGCAAGAAGCGCGATGACCTGCAGGACGCGATCGCGGTGCTGAAGGCCGGCAAGTTCGAACTGCCGCTGCAGTTCAACAACTTCCGCGACTGA
Protein sequence:
MPSFDVVSEVDTHELTNAIDQANRELATRFDFKGVDAKFERDGDVINQTAPTEFQLKQMNDILRARLAARGIDVLSLEFGDIETNLAQARQKITVKQGIEQKIAKKIAAALKEAKLKVESQINGDKLRVQGKKRDDLQDAIAVLKAGKFELPLQFNNFRD
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 17968.5 | 160 | 6.62 | -0.486 | 26.31 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR007551,IPR035571,IPR035570,IPR036183
Pfam: PF04461
SMART:
KEGG:
PRINTS: