Effector profile
| PlantPEAD ID: PlantPEAD18317 | Uniprot ID: A0A246HN18 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 40324 | Pathogen type: Bacteria |
| Species: Stenotrophomonas maltophilia | Strain: 13146 | Other name: Pseudomonas maltophilia,Xanthomonas maltophilia |
| Gene name: | NCBI Gene ID: NIVS01000020 | |
| Entry name: A0A246HN18_STEMA | Protein name: UPF0234 protein CEE60_10605 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAATCGCGGAAATTATCGAACTGCAGCGGGACCTCGAACGTCTCCTTCCGCAGCAGCGCCATCGCATCCTGCAGATCATCGCGCTTCTTGCCCGTCACCCGAAGCTTGTCGCCATTGATCTGGCTGTCCACCTTCAACTTGGCCTCCTTGATCTTCGCCGCGATCTTCTTGGCCACCTTCTGCTCGATCCCCTGCTTGACCGTGATCTTCTGCCGCGCACCGGCCAGATTGGACTCGATATCGCCAAACTCCAGGCACGCCGCATCGATCTTCCGCGCGGTCAGGCGCTGGCGCAGGATGTCCGTCATCTGCTGCAGCTGGAAATCGCTCGGCGCGGACTGCGTGATCACGCTGTCCTCCAGCACGAACTTCGCGTCCACGCCCTTGAAATCGAAACGCGTGGACAGCTCGCGGTTGGCCTGGTCGACCGCGTTGGTCAGCTCGTGGGTGTCGACTTCGGAAACAACGTCAAAAGAGGGCAT
Protein sequence:
MPSFDVVSEVDTHELTNAVDQANRELSTRFDFKGVDAKFVLEDSVITQSAPSDFQLQQMTDILRQRLTARKIDAACLEFGDIESNLAGARQKITVKQGIEQKVAKKIAAKIKEAKLKVDSQINGDKLRVTGKKRDDLQDAMALLRKETFEVPLQFDNFRD
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 18043.5 | 160 | 5.93 | -0.5 | 41.51 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR007551,IPR035571,IPR035570,IPR036183
Pfam: PF04461
SMART:
KEGG:
PRINTS: